Coffea arabica (coffee): 113689597
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Entry
113689597 CDS
T11342
Name
(RefSeq) transcription factor RAX1-like
KO
K09422
transcription factor MYB, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113689597
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
113689597
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
113689597
NCBI-ProteinID:
XP_027063157
UniProt:
A0A6P6SCC2
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Position
1e:46193481..46195541
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AA seq
364 aa
AA seq
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MGRAPCCDKANVKKGPWSPEEDAKLKEFIEKFGTGGNWIALPQKAGLKRCGKSCRLRWLN
YLRPNIKHGEFSDDEDRIICSLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM
IPLDPRKLPPFSNSLHTTSSPQSQAFSSLSQLYNDCSPYYSTSAKSCLTGFESFPSVQPN
LLFNGNNNNVNPMATITAANHHSYLQGHNQEGLISPMQFYPGKDNMLIFGGTDQASCSSS
DGSCSQISYGKEIKQEHMNGGSLHQGYNLSNSTNGYDHHHHQENQKFMVDYGNQISSTTW
GDGRGNDHDQKPSVVLCGNSTSTTQLQYDLEEVKQLISSSNMSLFFNDENKTHESREAMY
YYNY
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggctccttgctgtgataaggccaacgtgaagaagggaccctggtcacctgaa
gaagatgcaaagctgaaggagtttatagagaaatttgggactggtggcaactggattgct
cttcctcaaaaagctggtttgaagagatgtgggaagagctgcaggttgagatggcttaac
tatcttaggccaaacatcaaacatggggaattttctgatgatgaagacagaataatctgc
agtttgtatgcaagcattggaagcaggtggtcaattatagctgcacagttgccaggaagg
acagataatgatatcaagaactactggaataccaagctgaagaagaagctcatggggatg
attccattagacccaagaaaactacccccattttcaaattctcttcatacaacttcatca
ccacaatctcaagctttttctagcctgtctcaactatataatgattgcagcccttattat
tcgacctcagcaaagtcatgtctcacaggctttgaatcctttccctcagtccagccaaat
ctgctgttcaacggcaacaacaacaacgttaatcctatggctactattactgctgctaat
catcattcttatcttcaagggcacaatcaagagggtttgattagtcccatgcagttttac
cctggaaaggataatatgctaatctttggaggtactgatcaagcaagttgttcatcatct
gatggaagttgcagccagatcagctatggaaaggagatcaaacaagagcatatgaacggt
ggtagtcttcatcagggttacaatttgtctaacagtactaacggttatgatcatcatcat
catcaagaaaaccaaaaattcatggttgactatggaaatcaaatcagttcaactacatgg
ggtgatggaagaggtaatgatcatgatcagaagccaagtgtagtgctttgtggaaacagt
actagtacaactcaactccagtatgatcttgaggaagttaagcaactgattagctctagt
aacatgagcttgtttttcaatgatgaaaacaagacacatgagagtagggaggctatgtac
tactacaactactga
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