Coffea arabica (coffee): 113689924
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Entry
113689924 CDS
T11342
Name
(RefSeq) CSC1-like protein At3g21620
KO
K21989
calcium permeable stress-gated cation channel
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113689924
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113689924
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
113689924
NCBI-ProteinID:
XP_071906938
UniProt:
A0ABM4UI44
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Position
5c:36154787..36170943
Genome browser
AA seq
768 aa
AA seq
DB search
MATIADISVAASINILSAFAFFVAFAILRIQPINDRVYFPKWYLKGLRSSPLQSGAFVHK
FVNLDFHSYLRFLNWMPAAMRMPEPELIDHAGLDSAVYLRIYLTGLKIFVPIAVIAFTVM
VPVNWTNSTLEHSNLTFSNIDKLSISNIPHGSKRFWTHIVMAYVFTFWTCYVLKREYETI
TSMRLQFIASEHRRPDQFTVLVRNVPPDPDESVSELVEHFFMVNHPDHYLTHQVVYNANK
LSELVNEKKNKQNWLDYYQLKYARNQSRRPTSKSGYLGFWGKTVDTINFYTSEIERLSKE
IAAERLKIDNNAKYIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPCDVYWNNL
AIPYVSLTIRRLVIAVAFFFLTFFFMIPIAFVQSLANVEGIEKALPFLKPIIEKKVIKGF
IQGFLPGIALKIFLIFLPSILMLMSKFEGFSSISALERRSATRYYIFQFINVFLGSIITG
TAFQQLNNFIHQSPNEIPKTIGVSIPMKATFFITYIMVDGWAGVAGEILRLRPLIIYHLK
NFFMVKTETDREEAMNPGSLGFNTGEPQIQLYFLLGLVYAVVSPILLPFIVIFFGLAYIV
YRHQIMNVYNQEYESAAAFWPDVHGRIIIALIVSQLLLLGLLSTKDASQSTPFLITLPVL
TICFDRYCKGRYEPAFVRYPLQQAMMKDILNRTREPNVNLKDYLRSAYIHPVFKAGDDYE
NNLVSEDEEQEPTLVPTKRQSRRSTPFSSKYSGSSQSLPYEVDQNLQP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgactattgctgatatttctgttgcagcatctataaatatactcagtgcgtttgct
ttctttgtggcttttgcgatactgagaattcagccaatcaatgatagggtatatttccca
aagtggtacctgaaaggtttgagaagcagtccattgcagtcaggcgcttttgtccataaa
tttgtcaatttggacttccattcatatttgagatttttgaattggatgcctgctgcaatg
cgaatgccagaacctgagcttattgatcatgcaggattggattctgctgtttacttaaga
atttacttgacagggcttaaaatatttgttcctattgcagtaattgctttcacagttatg
gtacctgtcaattggaccaatagcactttagagcattccaatttgacttttagcaacata
gacaagctttcaatttcaaacattcctcatggatcaaaaagattctggactcacatagta
atggcttatgtctttacattctggacatgttatgttttgaagagggaatatgagacaatt
acatcaatgagattgcagtttattgcttcagaacatcgacgtccagatcaatttacggta
cttgtaagaaatgtgccaccagaccctgatgaatctgttagtgaacttgtggagcatttc
ttcatggtcaaccatcctgatcactatctaactcatcaggtggtttacaatgcaaacaag
ctctctgaactcgtgaatgagaaaaagaacaagcagaactggcttgactactatcaactg
aagtatgctaggaaccaatcaagaaggcccacatcaaagagtggttatcttggcttttgg
ggtaaaacagtggatactatcaatttttacacctctgaaattgaaagactttcgaaggaa
atagctgctgagagactgaagattgacaataatgctaagtacataatgcctgcagcattt
gtttcctttaaaaccagatggggagctgctgtttgtgctcaaactcagcagtcaagaaat
ccaaccttgtggctaactgaatgggctccagagccctgtgacgtgtattggaataatcta
gcaattccctatgtctcacttactattaggaggcttgtcatagctgttgcatttttcttc
cttacctttttctttatgattcccatcgcttttgttcagtcccttgcaaatgtagaggga
atagagaaagcacttcctttcctgaagccaataattgaaaagaaagtcattaagggattc
atccagggttttcttccaggaattgctttgaagatttttctcatatttttaccatcaata
ctgatgttgatgtcgaaatttgaaggattcagctccatatcagctcttgaaagaagatct
gcaactagatactacatttttcagttcataaatgtctttcttggaagcatcatcactgga
acagcatttcagcaattaaataactttattcaccagtcaccaaatgagattccaaagaca
attggtgtctccatacctatgaaagctaccttcttcataacgtacataatggtggatgga
tgggctggagttgcaggcgagattcttagattgagacctttaattatctatcacctcaaa
aatttcttcatggtaaagactgaaactgatagggaggaggcaatgaatcctgggagcctg
ggtttcaacacaggcgaacctcagatacagctgtatttcttgctggggctggtttatgct
gttgtttctccaattttgcttccttttatcgtcatattctttggactagcatatatcgta
taccgtcatcagattatgaatgtctacaatcaagagtatgagagcgctgcagcattctgg
cctgatgttcatgggcgcatcataatagcattgatagtctcccaactgcttttactgggg
ctgttgagtacaaaagatgcttctcagtcaactccatttctcattacactccctgtattg
accatatgcttcgacagatactgcaaaggtcgttatgaacctgcctttgttagatatcca
ttgcagcaagctatgatgaaagatatactgaatcgtacaagggagccaaatgttaatcta
aaggattaccttcgaagtgcttacatccacccagtcttcaaggccggagatgattatgag
aacaatttggttagtgaagatgaggagcaagaacctactcttgtccccacaaaacgccag
tctcgaaggagcaccccgttttccagcaaatacagcggttcatctcagtctttaccatat
gaagttgatcagaacttgcagccctga
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