Coffea arabica (coffee): 113689928
Help
Entry
113689928 CDS
T11342
Name
(RefSeq) E3 SUMO-protein ligase MMS21 isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113689928
03400 DNA repair and recombination proteins [BR:
carb03400
]
113689928
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113689928
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
113689928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-C3HC4_2
Med18
zf-C3HC4
IF-2B
zf-RING_2
U-box
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
113689928
NCBI-ProteinID:
XP_071905257
UniProt:
A0ABM4UD98
LinkDB
All DBs
Position
5e:complement(51292221..51295698)
Genome browser
AA seq
249 aa
AA seq
DB search
MASTSAPHRSNAGGYSRMKSAASKLYNDNQSLIAEMRRAFNMMKEIAVDLEKDKKSDLVK
ELESGVAELLEASDDCMHLSTAILSVGNEYQPRQELTDFKKLLDDEITKSKSTSSSTSQN
HQFLRQFREAVWNVHHSGIPMPGEEQEDIVMTSTESNILNKTCPVTGKPVTELADPVRSM
DCKHVYDKNAIMYHMRSMKSKCPCPVAGCPKELQVHRLICDPLLLVEIEEMRTMSKGTAQ
PGVIEDFTG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacctcagctcctcatcggagcaacgccggcggctatagcagaatgaagtcg
gcagcatccaagctttacaacgacaatcaatctcttatagctgaaatgaggagggctttt
aatatgatgaaagaaattgcggttgatttggagaaagataagaagtccgatttggttaaa
gagcttgaaagtggagtagcagaactgttagaagcttctgatgactgcatgcatctttca
actgctattctgtctgttggaaatgagtaccaacccaggcaggagctaacggattttaag
aagttactggatgatgagattacaaaatcaaagtcaacttcatcatcaacttcacaaaac
catcagtttttacgacaatttagggaagctgtctggaatgttcatcattcaggcatccca
atgccaggtgaggagcaggaggacattgtgatgaccagtaccgaaagcaatattctcaat
aaaacttgcccagtgactgggaagccagtcactgaactagcagacccagtgcgaagcatg
gactgcaagcatgtttatgacaagaacgctatcatgtatcacatgagatccatgaaatcc
aagtgtccttgtcctgtagcaggttgccctaaagagttgcaggtgcatagattgatatgt
gaccctctgttgttagtagaaattgaagaaatgcgcacaatgagcaaaggaactgctcaa
cctggggttatagaagattttactgggtga
DBGET
integrated database retrieval system
