Coffea arabica (coffee): 113690018
Help
Entry
113690018 CDS
T11342
Name
(RefSeq) proteasome activator subunit 4 isoform X1
KO
K06699
proteasome activator subunit 4
Organism
carb Coffea arabica (coffee)
Pathway
carb03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
113690018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
carb03051
]
113690018
Proteasome [BR:
carb03051
]
Eukaryotic proteasome
Regulatory particles
PA200
113690018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PSME4_mid
PSME4_C
HEAT_PSME4
CLASP_N
Motif
Other DBs
NCBI-GeneID:
113690018
NCBI-ProteinID:
XP_071905500
UniProt:
A0ABM4UE02
LinkDB
All DBs
Position
5e:complement(54063705..54079961)
Genome browser
AA seq
1820 aa
AA seq
DB search
MHLYNAWLPPAVAEETKKEKESFHKVLKSVKESYKVDDPESVYATLKWVSVIDLFIKAKS
ELLMEDVTAVVKTGLELFQISENKLHVQVRWGNLLVKILNKYRKKLSLKVQWRPLYDTLI
HTHFKRNTGPEGWRVRQRHFSTVTSLVRSSRRFFPPGSAFEIWSEFRSLLENPWHNSSFE
GSGFVRLFLPTNLDNQDFFSQEWMNLCLDHWDCVPNSQFWNSQWASVTARVIKNYKFIDW
EKFLPTLFNRYLNMFEVPVANGSGSNPFSVDVSRNTRFLFSNRTVTPSKAIAKSIVYLLK
PGGAAQKYFEKLVNLLEQYYHPSNGGRWTYSLERFLAYLVHIFHKRLLHEQMSSRDDGKK
SELFLQQSDRLSFINALLKLIDRGQYSKNENLSDTVAAATSVLSYLEPSLVLPFLASRFH
MALETMTATHQLKSAVTSVAYAGRSLFLTTLSCSPFKQDDFGGTDSFSDLLMIALSNALL
GLDANDPPKTLATMQLIGSLFSNMALLEDSTNELSPLPEFQFSEWLDEFLIRLFSLLRHL
EPSGVLNEGVHSSTTSGTILVEDGPYYFCMLEIVLGRLSRALYKQALNKISKFVKSNILP
GAIAEVGLLCCACVNSNPEEAVLHIVEPILLSVISSLRETPVMGYGGRRTSVAIGRSKCF
FQEKATLSPALETNIEYQLKILSVAISYGGPALLRYKDEFKEVIFSAFDSTSWKVNGAGD
HVLRSLLGSLIHYYPIDQYKCLLRHSAAASLEEWISTKDFSNAVPPVGPKWHIPCDDEVE
FANELLKLHFDCALDDLQKICQSKIHCDPGNEKEHLKVTLLRIDSSLQGILSCLPDFRPS
VGNGMVEDSGLFSFLIAGATGSLVGSTELREKAAEIIHAACKYLLEEKSDDSILLLLVIR
IMDALGNYGSSEYEEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKRRPRWALIDKAYMH
STWRSSQSSYHLFRTSGNISPSDHVLILLDDLLNLCLHSYETVRTLAGKSLLKMLKRWPS
TISSCVYALSENLKAPSSPEYAVLGSCAVLSTQTVLKRLTSDAKALCCFLRGILSSSRHE
SLKSQKAITELFVKYNIYFEGIPRSILRASGIHSDATDFSDLVSEIGSMSFESTNLHWRY
NLMANRVLLLLSMASANDPHSSTNILKETSGHFLKNLKSQLPQTRILAISALNTLLKESP
YKVSAGNPVFIRDVQGTTKSSLEGALSIIFQEEGFFNETLSSLSHVHIIADADSASSRGH
HGNSSFQSLADKSITHFYFDFSASWPRTPNWISLLGSDPFYSNFARIFKRLTQECGMPVL
LALRDALIEFVNSQERSKQCVAAEAFAGVLHSDVAGVSEAWDSWMMTQLQNVIYSQSVES
VPEWAACIRYAVTGKGKYGTRVPLLRQRVMDCLMTPLSQTVTSSVVAKRYTFLSAAFIEI
SPQRMLRGETELHFTLLKELVCNMSHSSAQVRESIGVTLCVLCSNIRLHESCSPSNSLEG
VRGDVYGNFEGGSWDEYIVQRASELAVNIHNISACDILETSLDKTLDNGISKDHSRDDVN
WMETVFHFVISSLKSGRSSVLLDVIAGLLYPIISLQETSNKDLSTLAKAAFELLKWRVFH
GTRTQKAISLILSLGSDSNWRTRSATLTFLRTFMYRHTFILSNVDERQIWHTVEKLLADN
QIEVREHAAAVLAGLMKGGDADLAEDFRNRAFREANIILKKRRQRNLRSGLSVASIHGPV
LALAACVLSIPYDMPSWLPEHVTLLAHFVSEPSPVKSTVTKAVAEFRRTHADTWNIQKDA
FSEDQLEVLADTSSSSSYFA
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtacaatgcttggttgccgccggcggtggcggaggagacgaagaaggagaaa
gaatcattccacaaagtgttgaagtccgtgaaggaatcgtataaagtggatgatcctgaa
tctgtttacgccactcttaaatgggtctccgttattgacctgtttataaaggcaaaaagt
gaacttttaatggaagatgtgacagctgttgtgaaaactgggttggaactgttccaaata
tcagagaacaaacttcacgtgcaggttagatggggaaatctcttggtaaaaatattgaac
aaatatcgaaagaagttgtccttgaaagttcagtggcgccctctgtatgataccctgatc
catacgcatttcaagaggaacactggcccagaagggtggagagtgagacaacgacatttt
tcgacagttacttctcttgttcgatcctctaggagattcttccctccaggctctgccttt
gagatatggtctgaatttagatctttattggaaaacccatggcataactcttcttttgaa
ggttctgggtttgttcggctgttccttccaacaaacttggacaatcaggacttcttttca
caagaatggatgaatttatgtttagaccactgggattgtgtaccaaatagtcagttctgg
aacagccaatgggcatccgttacagctcgcgtaataaagaattataagtttattgactgg
gagaagtttttacctactcttttcaatagatacttgaatatgtttgaggttcctgtagct
aatgggagtggctcaaatccgttttctgtggatgtttcaagaaataccagattcttgttt
tcaaatagaacagttactccatcaaaggctattgctaaatcaattgtttatctattgaaa
cctggtggtgcagcacaaaaatactttgagaaattggtcaacctcttggaacaatattat
catccttctaatggcggtcgttggacttattcactggagcgctttttggcttacttggtt
cacatatttcacaaacgtttgctacatgagcaaatgagcagcagggatgatggcaagaaa
agtgaactcttcctccagcagtctgaccgactttcttttataaatgcattgctgaagctg
attgatcgtggtcaatatagcaagaatgagaatctatctgatacagttgctgcagcaacc
tctgttttgtcatacctggaaccttcacttgttctaccatttttagcatctcgcttccac
atggctttggagactatgacagctacacaccagttgaagagtgctgtgacatctgtggct
tatgcagggcgatcgctgtttctcactaccctgtcatgttcacctttcaaacaagatgat
tttggtggcaccgattctttcagtgatcttctgatgattgctttgtccaatgccttactt
ggtttagatgccaatgatccaccaaaaaccttggcaaccatgcaactgattggttctttg
ttctccaatatggctttgctggaagatagtacaaatgaattatcacccttaccagaattt
cagttttccgagtggcttgatgagttcttgattcgtcttttttctttgcttcggcacttg
gaaccaagcggtgttctgaatgaaggagttcattcatcaacaacttcaggaacaattctt
gttgaggatggtccttactacttctgcatgttagaaattgtcctagggaggctttcaaga
gcactttataaacaggctttaaacaaaatttccaagtttgttaaatcaaatattcttcct
ggggcaattgctgaagtaggactactatgttgtgcctgtgtcaattcaaatccagaagag
gcagttcttcatatcgttgagccaattctactgtctgttatatcttccttgagagagaca
cctgttatgggttatggagggagaagaacttctgtagccattggacgaagcaagtgtttc
ttccaggaaaaagccacactttctccagctcttgaaacaaatattgagtatcaattgaaa
atattatcagttgcgatcagctatggaggtcctgcacttcttcgctacaaggatgagttt
aaggaagtgattttttctgcgtttgattcaacatcttggaaggtaaatggtgctggtgat
cacgttctcagatctcttcttggaagcttgattcattactatcctattgaccaatacaag
tgtcttttgcgtcattctgctgctgcatcattagaggaatggattagcacaaaagatttt
tcaaatgctgtaccacctgtcggtccaaagtggcatatcccttgtgatgatgaagttgaa
tttgcgaatgaactcttgaagttgcactttgactgtgctttagatgaccttcagaagata
tgccaatctaagatccactgtgatccaggaaatgagaaagagcatttgaaagtgactctt
ttgcgtattgattcatcattacaaggcattttgtcatgcttgcccgatttcagaccgtct
gttgggaatgggatggtagaagattctggtcttttttctttcttaattgctggagcaaca
ggttcacttgttggcagcacagaattgcgagaaaaggctgctgagattatccatgctgct
tgcaaatacctgttggaggaaaaatctgatgatagcattctcttgctgcttgtcattcgt
ataatggatgctttaggaaattatggaagttctgaatatgaggagtggtcgagtcaccgg
caggcttggaaactggaatctgctgccataatagaacctccgatcaatttcattgtgtca
tctcattctaaaggaaaaagaaggcctagatgggctcttatcgacaaagcatatatgcac
agcacttggagatcatcacagtcatcataccatctgtttcggacgagtggcaacatatct
ccatctgatcatgtgcttatcttgctggatgatcttcttaatctgtgtttacacagctat
gaaacagtccggacacttgctgggaaatctcttctgaaaatgctgaaaagatggccttct
acaatctcgagctgtgtgtatgctctgagtgaaaatttaaaggctccgagttcaccagaa
tatgctgtcttgggctcttgtgcagtcctttcaacccaaactgttctcaagcgtttgaca
tcggatgcaaaggccctctgttgttttcttcgtggaattctttcaagctctcgtcatgaa
tcactaaaatctcagaaagcaattactgagctctttgtcaagtacaatatctattttgaa
ggtatacctagaagcattttaagggcatcagggattcattcggatgcaactgatttctca
gatttggtttctgagattggttccatgagttttgaaagtacaaatttgcattggaggtat
aatctgatggctaacagagtgctgctacttttgtctatggcatctgcaaatgatccacat
tcatctacaaatattcttaaggaaacttctggtcatttcttaaagaatttgaagagtcaa
cttccacagacgagaattctagctatctctgccttaaatactctgttaaaagaatcacct
tacaaagtctctgctggaaaccctgttttcattcgggatgtacagggaaccaccaaatct
tcgcttgaaggagctttgagtattatatttcaagaagaggggttcttcaatgagactctg
agtagtctttctcatgtgcatataattgctgatgcagatagtgcatcctcccgaggacat
cacggaaattcttccttccagagcttggcagacaaatcaatcacacacttctattttgac
ttctctgcttcatggcctcgtactcctaactggatatctttgctaggaagtgatcctttt
tattcaaattttgctagaatcttcaaacgtctaacccaagaatgtggcatgcctgttttg
ctggcacttagagatgcattgatagagtttgttaattcccaggagaggtctaagcaatgt
gttgcagctgaggcatttgctggagtcttgcattctgatgtcgctggtgtttcagaagca
tgggacagctggatgatgacccaattacaaaatgttatttattcccaatcggtggaatct
gttccagagtgggctgcttgtattcgttatgcagttactggtaagggaaaatatggtact
agggtacctcttctgagacaaagagtcatggattgtctaatgactccattgagccagaca
gttacttcttcagtagttgccaagcgctacacttttctttcagctgcatttatagaaata
tccccacaaaggatgctaagaggtgaaacagagcttcattttacgctattgaaggagttg
gtgtgtaatatgagtcattcatcagctcaagtgagagaatcaattggagttaccctatgt
gtgttatgctcaaatattcggcttcatgaatcctgttctcctagtaactctcttgaaggg
gtaaggggtgatgtatatggaaattttgaaggtggaagttgggatgaatatattgtgcaa
cgagcttcagaacttgcagtgaatatccacaacattagtgcttgtgacatattggaaacc
tccttggacaaaaccttagacaatggaatatcaaaagaccattctagagatgatgttaat
tggatggaaacggtattccatttcgtcatctcttctctgaagtctggaagatcttcagtt
ttgctggatgttattgcgggcctactgtaccccatcatctccttgcaggaaacatcaaat
aaagatttgtcaactctagccaaagcagcttttgaattgctaaaatggagggttttccat
ggaacaagaacccagaaagccatctctcttattctttctttaggaagtgactccaactgg
cgaactagatctgcaactttgacgtttttgaggacttttatgtacaggcacactttcatc
ctctcaaatgtggatgagaggcaaatatggcatactgttgaaaagctacttgcagacaat
caaattgaggtaagggagcatgcagctgcagtattagctggcctcatgaagggtggagat
gctgatctagctgaagacttccgtaacagagcttttagggaagcaaacatcatcctgaag
aaaagaaggcaaagaaatttgagatccgggctttctgtagcgtcaattcatggtcctgta
cttgctttagcagcttgcgtattatccattccgtacgatatgcccagctggctgcctgag
catgttacattacttgctcattttgtttcggagccatcacctgttaaatccacggtcaca
aaagcagttgcagaattccgacggacgcatgctgacacctggaatatccaaaaagatgct
tttagtgaagaccagctggaggttcttgcagatacatcctcctcatcatcatatttcgct
taa
DBGET
integrated database retrieval system
