Coffea arabica (coffee): 113690020
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Entry
113690020 CDS
T11342
Name
(RefSeq) transcription factor MYB80
KO
K09422
transcription factor MYB, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113690020
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
113690020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
113690020
NCBI-ProteinID:
XP_027063646
UniProt:
A0A6P6SCY4
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Position
5c:48706187..48708361
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AA seq
323 aa
AA seq
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MGRIPCCEKDNVKRGQWTPEEDHKLSSYIAQHGTRNWRLIPKHAGLQRCGKSCRLRWTNY
LRPDLKHGQFSDAEEQTIVTLHSVLGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMG
IDPVTHKPFSHLITEIATTLAPPQVPHLAEAALGCFKDEMLHLLTKKRIGSYQMQQIGLT
PVNTAATHVKHEDRDETIEKIKYGISRAIKDPETSPTNKPWDPVVAGSANFAGSCNAFAA
PDSGFHYGLSSLVNEGNGSAWNQSMCPGSSATGDRQCQLDEKLEDENGQDWKGGKEMRDG
ATLFNSDCVLWDLPSEELMSPMV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaattccatgctgcgagaaagacaacgtcaaaaggggtcagtggacgccggag
gaagaccacaagctctcttcctacattgctcaacatggcactcgcaactggcgtcttata
cccaaacatgctggtttacagagatgcggaaagagctgcagattacggtggaccaactac
ctccgtcctgaccttaagcacggccaattctcggatgcagaagagcagaccatcgtcact
ctgcattcagttctggggaatagatggtccgtgattgcagctcagctgcccggtcgcacc
gataacgatgtcaaaaaccattggaataccaagctcaaaaagaagctatcaggcatgggt
atcgatcccgtaactcacaagcctttctctcacctcattactgagattgccaccactctg
gctccaccgcaagttccccacttggcagaagcagccttggggtgtttcaaggatgagatg
ctccacctcctcaccaagaaacgtattggcagctaccaaatgcagcaaataggtttaaca
ccagttaacacagcagctacacatgttaagcacgaggatagggacgaaaccattgagaag
attaagtacggaatatcaagagccataaaggaccctgaaacttcacctacaaacaagcct
tgggaccctgttgtagcaggatccgcaaattttgctggaagctgcaatgcatttgctgcc
ccagattccgggtttcattatggcctttcatcccttgtcaatgaaggaaatggatctgca
tggaaccagagcatgtgcccaggaagcagtgcaacaggagaccgacaatgccagctggat
gagaaactcgaagatgaaaatggtcaagactggaagggtggaaaagaaatgagagatggg
gccacccttttcaattcagactgcgttttgtgggatttaccatctgaagaactaatgagt
ccaatggtctaa
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