Coffea arabica (coffee): 113690089
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Entry
113690089 CDS
T11342
Name
(RefSeq) tryptophan decarboxylase TDC2-like
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00350
Tyrosine metabolism
carb00360
Phenylalanine metabolism
carb00380
Tryptophan metabolism
carb00901
Indole alkaloid biosynthesis
carb00950
Isoquinoline alkaloid biosynthesis
carb00965
Betalain biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
113690089
00360 Phenylalanine metabolism
113690089
00380 Tryptophan metabolism
113690089
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
113690089
00950 Isoquinoline alkaloid biosynthesis
113690089
00965 Betalain biosynthesis
113690089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113690089
Enzymes [BR:
carb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
113690089
4.1.1.105 L-tryptophan decarboxylase
113690089
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113690089
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Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-GeneID:
113690089
NCBI-ProteinID:
XP_027063707
UniProt:
A0A6P6SDX4
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All DBs
Position
5c:complement(39615133..39617003)
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AA seq
504 aa
AA seq
DB search
MGSIDANNGAAFATSPVAPFKPLDPEEFRKQAHRMVDFIADYYKNIENYPVLSQVEPGYL
RTRLPETAPYLPEPFETILEDIQKTIIPGLTNWLSPNFFAYFPATVSSAAFLGEMLCTGF
NSVGFNWLASPAATELEMVVMDWLANMLKLPKSFMFSGTGGGVLQGTTTEAVLCTLIAAR
DRALETIGIDNVGKLVVYGSDQTHSFFIKTCKLAGIFPCNIRIIPTTAEDNFSLSPEALH
KQIQADVADGLVPLFLCVTVGTTSTTAVDPVSQLAEVANDFNVWIHVDAAYAGSACICPE
FRQHLDGIERVDSLSLSPHKWLLCFLDCCCLWVKKPELMVKALNTNPEYLRNQRSESDAV
VDYKDWQIGTGKRFRALRLWLIMRSYGVANLQSHIRSDIQMAKIFEGFVKSDPRFEIVVP
RAFSLVCFRLNPLRMSHATYVELLNMKLLDLVNSTGRVYMTHTKVGGVYMLRFAVGATLT
EDRHVYAAWELIKECADALLDGNL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtattgatgcaaataacggtgctgcttttgcaacttcaccagttgcaccattc
aagccacttgatcctgaagaattcagaaaacaagcccatcgcatggttgacttcatagct
gactattacaaaaatatcgaaaactatcctgttctcagccaagttgagcccggatatctc
cgaacccggctgccagaaaccgccccgtatctccctgagccatttgaaaccattttagaa
gatattcaaaagactataatccctggattgactaactggttaagccctaacttttttgca
tattttcctgctacagttagctctgccgcttttctgggagaaatgctgtgcactggcttt
aactctgtagggttcaactggcttgcatccccggccgccactgagctcgaaatggttgtc
atggattggttggctaacatgcttaagctccccaagtccttcatgttttccggcactggt
ggtggtgttttgcagggaaccaccactgaggctgttctttgcaccctcatcgccgcccgt
gaccgcgctcttgagacaattggcattgacaacgttggcaagctcgtcgtttatggatct
gatcaaacacacagctttttcatcaagacttgcaagttagctggtattttcccatgcaat
ataagaataatccctactactgctgaagacaacttttctttatcccccgaggctttacat
aagcaaatccaagctgacgtggcagatgggctggtcccacttttcctatgtgtaactgtg
gggaccacttccaccaccgccgttgacccagtgagtcagctagctgaagttgcaaatgat
ttcaatgtgtggattcatgttgatgctgcttatgcaggcagcgcatgcatatgtcccgag
ttcaggcaacacttggatggaattgaacgagttgactcactgagtttgagccctcataag
tggctactgtgttttttggattgctgttgcttgtgggtcaagaaacccgagttgatggtg
aaggcattgaacaccaacccggagtacttgagaaaccaaaggagtgagtccgacgcagtt
gttgattacaaagattggcaaattggcacaggcaaacgcttcagagcgttacgattgtgg
cttattatgcgtagttatggagttgcaaatctccaaagccacatccgatccgatatccaa
atggctaaaatcttcgaagggtttgtgaaatccgacccgaggtttgaaatagttgtaccg
cgtgcattttcacttgtatgtttccggcttaatcctttgagaatgtcacatgcaacgtac
gttgagctcttaaatatgaagctactcgacctggttaactcaacgggccgagtttatatg
actcacactaaagttggtggtgtatatatgctgagatttgctgtgggagccacactaaca
gaagatcgccacgtgtatgctgcctgggagttgattaaagaatgcgccgacgctttactc
gatggaaatctttag
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