Coffea arabica (coffee): 113690121
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Entry
113690121 CDS
T11342
Name
(RefSeq) probable disease resistance protein At1g61300 isoform X1
KO
K13459
disease resistance protein RPS2
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113690121
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_RPS2
LRR_8
WHD_DRP
LRR_14
LRR_4
LRR_R13L1-DRL21
LRR_Zer-1
LRR_EndoS
nSTAND_NTPase5
ATPase_2
AAA_22
NACHT
LRR_1
TniB
LRR_9
Motif
Other DBs
NCBI-GeneID:
113690121
NCBI-ProteinID:
XP_027063745
UniProt:
A0A6P6SCA2
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All DBs
Position
5c:complement(41999478..42004738)
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AA seq
975 aa
AA seq
DB search
MSKQMRILNARETDIRQMVTIERVRNGMEPKAEVKLWLENVDQIKDSVNKVKEDSADDRR
CLIGCFPNYYFRMKLGNMVEEQIHKVNELLEQGKFSEGAVVGMLPERGKTLPTTMLMGET
AKRSSRRIWHYLMDESIRTIGIFGMGGVGKTTIMIEINNRLVREDVYFDTVIWVTASREP
NLPKLQNDIAKSIGLCFDSDDDGMTRASKLWNALRGPKKFLLIIDDLWEAFSHQEVGIPC
QEFSNSFKLVITTRSLSVCRGMETMREVEVELLSSEEAWDLFKHKVGEEVVSSLSIEAVA
KEIAKECGGLPLAIATVGRALRKEYNVRQWRIALRELQNSTIRIDGMENQVLSRLRFSYE
RLKDDTTRSCFLFCAVYPKDHHVNVEELIRYWIYEGLLGNLGDMETKMQQGYILVDELKN
ACMLESICQHGSIDEHVKMHDLIRDMAIALTGANQIYMVRARHSICKPPLHEEWHPDLER
VSLMRNDLSSLDCEPRCPKLSTLLLQYNSLSKGINPSFFNHMQNLQVLDLSYTGILRLPD
SFSNLENLRALLLCSCWNLHYVPTLSKLKELRVLDLSYSSIEHMPHGMEMLANLRRLDLS
HCRANDFQSSFLSNYRMLENLLLIGLWQSLELGKVFVDQLTSCINLSLFEANFRTVEDFN
YYTMSGHWSQVESFKFCIGYPESSMHFGRNSVALIGAHMFHREIPALLPGRIHELVLLAC
SGINHLPTSISFASSQLQICKLQHCDDMEWIITSGWSTFPTLESLEIEGLGKLHTFCMGI
PQEGTLANLKVLHVTQCNDLKTVLSFELVQNLKSLEEIVIENCERIEEIIGDERGGEDVT
QVDNAEIILPRLQKLKLSSLPRLTSICWNRVMICDSLSIIEVHKCPELTALPFFVEIRQP
LIQSLKQIKGSRRWREDLTKSHPDCIGLLYSIFKVTQSSAAYDIFEPQNSAANEIFEEDD
GRNIGESASSSFGPR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaaatgagaattcttaatgcccgagaaacagatataaggcaaatggtaact
atagaaagggttcggaatggcatggagcctaaagctgaagttaagttatggctggaaaat
gttgatcagatcaaggactctgtcaataaggtgaaggaggatagtgcagatgatagaagg
tgtttgattgggtgtttcccaaactattattttcggatgaagctggggaatatggttgag
gagcagatccataaggtgaatgagcttcttgagcagggaaagttttcagaaggtgcagtg
gttggtatgttgcctgaacgtgggaagacacttcctacaactatgcttatgggagaaact
gcaaaaagaagttcaaggaggatttggcattacctgatggacgagagtattcgaacaatt
ggcatatttgggatgggtggcgtgggtaaaacaacaatcatgatagaaattaataatcga
ctggtgagagaagatgtatattttgataccgtcatttgggtcacagcatcaagggagcca
aatctcccaaaactacaaaatgatattgccaaatcaattggtttatgctttgatagcgac
gatgatgggatgaccagagcatcaaaactatggaatgccttgaggggaccgaaaaagttt
cttcttattatagatgatttgtgggaagcattttcacatcaagaggttggaattccttgt
caagaattctcaaactcttttaagttggtgattaccactcgatcattgagtgtttgccgt
ggtatggagacaatgagagaggtcgaagttgaattgctttctagtgaagaagcatgggat
ttattcaaacacaaggttggtgaagaagttgtttcatccttgagcattgaagctgttgcc
aaggaaattgccaaagaatgtggcggtctgccactagcaattgctacagtaggacgtgct
ttgagaaaagaatataatgtaagacagtggcgaattgctttaagagagttgcaaaactcc
actataagaatagatggaatggagaaccaggtattgtcacgtttgagatttagctatgag
agattgaaggatgatactacccgatcctgctttcttttctgtgctgtatacccaaaggat
catcatgtcaatgtagaagagctcataaggtattggatatatgaaggtctactgggtaat
ttaggggacatggaaaccaagatgcaacagggatatatcctagtagatgagctgaaaaat
gcttgcatgttggaaagtatctgccaacatggtagtatagacgagcatgtgaagatgcat
gacctaattagggatatggcaattgctctcacaggtgctaaccaaatctatatggttcga
gctagacatagcatatgtaagccccctcttcatgaagaatggcatccagatctcgaaaga
gtctcactgatgagaaatgatttgagctctttggattgtgaacctagatgtccaaagttg
agcacattactcttgcagtataattcactatccaaaggcattaatccttctttctttaac
catatgcagaacctgcaagttctagatttatcttatacaggcatacttaggttgccagat
tcattttcaaatttggaaaaccttcgtgcactactcctctgtagctgttggaatttgcat
tatgtaccaacgctatcaaaacttaaggagttgagggttttggacctttcttattcatcc
attgagcacatgccccacgggatggaaatgttagctaaccttagacgccttgacctctcc
cactgtagagccaatgactttcaaagtagttttctgtcaaattacagaatgctggagaat
ctactgctaattggtttgtggcagtcacttgaacttggtaaggtatttgttgatcagtta
acaagctgcattaacctgtcactgtttgaagctaacttcagaactgttgaggacttcaat
tactatactatgtcaggacactggagtcaagttgagagtttcaaattttgtattggctat
ccggaatcctcaatgcatttcggtagaaatagtgtagcattaattggagcccatatgttt
cacagagaaatacctgctttgttgcctggtaggattcatgagttggttctcttggcttgt
tcaggcatcaatcacttgccaacatccatcagctttgcttcttcacagctacaaatatgt
aaacttcaacactgtgatgatatggaatggataataacttcaggatggagcacctttcct
accctagagtcgttagagatcgagggtttgggcaagttacatactttttgcatgggaatt
ccacaggaaggaactcttgcaaatctgaaggtgttgcatgtcacccaatgtaatgatttg
aagaccgtcttgtcatttgagctggtgcagaacctaaaaagccttgaagaaattgttatt
gaaaactgtgaaaggattgaggagataattggtgatgaaagagggggagaagacgtgact
caagtggacaatgctgaaataatacttccacgattacagaaattaaagttaagttctttg
ccaaggctgacaagcatctgctggaatagggtaatgatatgtgattcattatccatcatt
gaagttcataaatgtcctgaacttactgcacttcccttcttcgtggaaattaggcagccc
ctgatacagtctctgaagcaaataaaaggaagcagaagatggcgtgaggatttaacgaag
tctcatccagattgcattggactcctgtactcaattttcaaagtaactcagagttctgca
gcatatgacatctttgaacctcagaattctgcagcaaacgagatctttgaagaagacgat
ggcaggaatattggcgaatctgcaagttcatcatttgggccaagatag
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