Coffea arabica (coffee): 113690349
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Entry
113690349 CDS
T11342
Name
(RefSeq) peroxisome biogenesis protein 5-like
KO
K13342
peroxin-5
Organism
carb Coffea arabica (coffee)
Pathway
carb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113690349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113690349
Membrane trafficking [BR:
carb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113690349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
TPR_7
TPR_12
TPR_9
PPTA
TPR_20
TPR_10
Permuted_GreAB-C
NGF
TPR_Slam
PEX18_PEX21_C
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
113690349
NCBI-ProteinID:
XP_027064007
UniProt:
A0A6P6SER2
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Position
5c:49154928..49163584
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AA seq
733 aa
AA seq
DB search
MAMRELVSGGAACATSGSSSSSNPLGSLANALLGSSSKTQERLREIPTSTAIPSDGSASV
GTGEPLSGLPGSELDHPLQPNAQGSEFLRGFRSADQHGLADVWDEIQRPQVNFPPEHVLR
QPDTNGPPQRVLSSFLHSFVNSSHGGIPFCPATLPVLGLSAGDKQCIRDRSSIMARHFFA
DKSEDFINAQVNALLSSLEIDNDIRAPGPAFKRYQELEKYWHETHGMRPGPNPADGWVAE
FAQHPVGHGDPSTWVQSFEQEHGANGWASEFEHEHAQLASMDHIRGATMPHLAAMEQTRM
LANTLAQNNDPKFQNSKFFQFVSKMSRGEITVEDNQIKPATLSAPGDWATEYQQQYSGGQ
TWADQFVHEELSKGPNGWVDEFASERGHVDDGWVNEFSKLHVNDWAEEFGRQVGEGTFGD
SSADNWASAYDEYLNEQTALKQQSESSRGVYVFSDLNPYVGHPNPLKEGQELFRKGLLSE
AVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMMRAQEVDPTNLEVLLALGVSH
TNELEQAAALKYLYSWLRHHPKYGTVVPPNQPDSLYYGDVATYFSDAARMSPDDADVHIV
LGVLYNLSREYDKAIESFQTALKLKPRDYSLWNKLGATQANSVQSADAILAYQQALDLKP
NYVRAWANMGISYANQGMYEESIRYYVRALAMNPKADNAWQYLRISLSCASRNDMLEACD
SRNLDFLQKEFPL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagggagctggtctccggcggagcggcgtgtgccacctcggggtcttcttct
tcgtcgaatccgctcggttctctagctaacgccctccttggctcttcctctaaaacccag
gaaaggcttcgagagattcctacatcaacagctattccatctgatggcagtgcctctgta
gggactggtgagccattgtcaggccttcctgggtctgaacttgatcaccccctgcaacct
aatgcccagggctcagaattccttagagggttccgctctgcagatcagcatgggcttgct
gatgtttgggatgagatacagagacctcaagtcaattttcctcccgagcatgtgctgcgt
cagccagatacgaatgggccacctcaaagagtattgtcaagctttctgcactcatttgtg
aacagtagccatggtggcattcctttttgtcctgccacacttccagtgttgggactgtct
gcgggtgataaacaatgtatacgtgatcggagtagtataatggctcgacacttttttgct
gataagagtgaagacttcatcaatgcacaggttaatgcattgttatcttccttagaaatc
gacaatgatattagggcccctggccctgcatttaaaagatatcaggagttggagaagtat
tggcatgagactcatggtatgagacctggacctaatccagcagatggatgggttgccgag
tttgcacagcatccagttggacatggtgatccgagtacttgggttcagtcatttgaacaa
gaacacggtgctaatggctgggcctctgagtttgagcatgagcatgcgcagcttgcatca
atggatcatataagaggtgcaactatgcctcatttagctgccatggagcagactcgtatg
ctggcaaacactttagctcaaaacaatgatccaaaatttcagaattcgaaattttttcag
tttgtgtcaaagatgagtcgtggtgaaatcactgttgaggacaatcaaatcaaaccagct
acattgtcagcacctggggattgggcaactgaatatcaacagcaatatagtggaggccag
acatgggctgaccaatttgtgcatgaagagctttctaagggacctaatggatgggtggat
gagtttgcttcagaacgtgggcatgttgatgatgggtgggtgaatgaattttctaaattg
catgtcaacgactgggcagaagagtttgggcgtcaggttggtgaaggaacatttggagat
agttcggctgataactgggctagtgcttacgatgagtatttgaatgaacaaactgctctc
aagcaacaatcagaatcatcacggggagtgtatgtgttttctgatttaaatccttatgtt
ggtcatcctaatcctttgaaagaaggccaggaactgttccgtaagggtcttttaagtgaa
gcagttcttgctttggaggctgaggttttgaaaaatcctgataatgctgagggttggagg
ttgctgggcattgcccatgctgaaaatgatgatgatcaacaggctattgcagcaatgatg
cgtgcacaggaggttgatcctacaaatctggaggttcttcttgcacttggtgtgagtcac
acaaatgaactggaacaagcagctgcattgaagtatttgtacagttggctacgccatcac
ccaaagtatggaacagttgtccctccaaatcagcctgattctctctattacggtgatgtt
gccacatacttcagtgatgcggctagaatgtcacctgatgatgctgatgtgcacattgta
cttggagttttgtacaacttatccagagaatatgacaaagccattgaatcctttcagaca
gctttgaaactgaaaccacgggattactcactctggaacaagcttggagcaacacaggct
aatagcgtgcagagtgctgatgctatattggcttaccaacaggctctagatttaaagccc
aactacgtgcgtgcttgggcaaacatgggaatcagctatgccaaccagggcatgtatgag
gaatccattcgttactatgtccgggctctcgcaatgaatcccaaggctgataatgcttgg
caatatttgagaatctctttgagctgtgcctcacggaatgatatgctggaagcctgtgac
tcacgaaatcttgatttccttcagaaagagttcccactttga
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