Coffea arabica (coffee): 113690372
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Entry
113690372 CDS
T11342
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36-like
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113690372
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113690372
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
90S particles
Helicases
113690372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HTH_56
Motif
Other DBs
NCBI-GeneID:
113690372
NCBI-ProteinID:
XP_027064033
UniProt:
A0A6P6SCW9
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All DBs
Position
7e:1074317..1078720
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AA seq
517 aa
AA seq
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MEDDIQVDQNFPLFSRRGKTNKATPSQINPAPPVTPAASTTTLQDLKPLLQKETDSDDPI
PTTPNHISFSDLGLAEWAVQTCKELGIKRPTPVQRHCIPRILAGQDVLGLAQTGSGKTAA
FALPILHRLAEDPYGVFALVITPTRELAYQLAEQFRALGSGLHLRCAVVVGGMDMINQAQ
TLMQRPHVVIATPGRIKVLIQENPDDVPAVFSNTKFLVLDEADRVLDVGFEEELRVVFQC
LPKDRQTLLFSATMTSDLQTLMELSANKAYFYEAYEGFKTVETLKQQYVFIPKNVKDVYL
LYILSKLEDMGVRSAIIFVSTCRSCQLLSLLLEELDVEAAALHSFKSQSLRLSAVHRFKS
GQVPILLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQND
VDLIHEIEAELGKQLEEFECKEKDVLAEITKVYKAKRVATMKMMDEGFEEKAKARKAQKL
KALAEKGLLKSSKKRKRKKGVSDQLVKVKKAYFHHLP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacattcaagtggatcagaacttccccttgttttctcgccgtggtaaaacc
aacaaagctactccctcccaaattaaccccgccccacctgttacccccgccgcctccacc
accaccctgcaagacctcaaacccctcctgcagaaggaaaccgattccgacgaccctatt
cccactactcccaaccacatctccttctccgacttgggcctggctgaatgggccgtccag
acctgcaaagaactcggaatcaagagacccactccggtacagcgccactgtatccctcga
atcctcgccggccaggacgtcttgggcctggcccaaaccggcagcggcaagaccgccgct
tttgcgctccccatactccaccgcctggctgaggacccttacggggtgttcgctctggtg
attactcccacccgggaactggcttaccagctggcggagcagttccgagcactggggtcg
ggcttgcacctgcgctgcgccgtggttgtaggtgggatggatatgatcaaccaagcccag
acgctgatgcagcggccccacgtggttatagcaactcccggaaggattaaggttctcatt
caggagaatcctgatgacgtccctgctgttttttccaataccaagttcttagttttagat
gaagcggacagagtgcttgatgtgggcttcgaggaggaactcagagtagtcttccagtgc
ttgccaaaggatcggcaaactctgcttttctctgctaccatgaccagtgatctacaaaca
ctaatggagctttctgcaaataaggcatacttttacgaggcatatgaaggattcaagaca
gtggagactcttaaacagcaatacgtttttatcccaaaaaatgtgaaggatgtttatctc
ctatacattctatccaaattggaagatatgggtgttcgctcagccatcatttttgtttcc
acctgcaggagttgtcagcttctaagtttgttgttggaagaacttgatgttgaagctgct
gcattgcattccttcaaatcccagtctttgaggctttctgcagtacatagattcaaatct
gggcaggttcctatattgctagcaacagatgttgcaagtcggggtttagatatcccaacc
gttgatcttgtcataaattatgacatcccaaggtttccacgcgattatgttcatcgtgta
gggcgcactgcaagagcagggagaggggggcttgctgttagttttattacccagaatgat
gttgatcttattcacgaaattgaagctgaacttggaaaacagttggaggaatttgagtgt
aaggaaaaggatgttcttgctgaaattacaaaggtttacaaggccaaacgggtggcaacc
atgaagatgatggatgaaggatttgaggagaaagcaaaagcacggaaagctcagaagttg
aaggcactagcagagaaaggactattgaaaagtagtaaaaagcgaaaaaggaaaaagggg
gtatctgatcaattggtgaaagttaagaaagcttactttcaccatcttccctaa
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