Coffea arabica (coffee): 113690598
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Entry
113690598 CDS
T11342
Name
(RefSeq) scarecrow-like transcription factor PAT1
KO
K27748
scarecrow-like transcription factor PAT
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113690598
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
GRAS
113690598
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Paralog
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
113690598
NCBI-ProteinID:
XP_027064389
UniProt:
A0A6P6S725
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Position
5c
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AA seq
544 aa
AA seq
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MQASQRPRKVGMPNTFFLNQPLQKVESYFLPHIQTFEPQLSCNNSRYGPSCPIQISHDRY
CTLESSSLTGNHTIYNSPSTVSFSPIGSPVSQQESLHMTDPVQSPETNYGSPLSGSCITN
DVNDLRHKLRELENAMLGPDSDFFGACDNLLPINEGALENSWRQMIEVIPRGDLKQILIA
CAKAVADNDTLISQWLMSELRQMVSVSGEPIQRLGAYMLEGLVAKLAASGSSIYKSLRCK
EPASFELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDENRVHIIDFQISQGSQWVTLIQ
AFAARPGGPPHIRITGIDDSTSAYARGGGLSIVGQRLSRLAESFKVPFEFHAAAMSGCEV
QPEDLGIQPGEALAVNFAFVLHHMPDESVSTENPRDRLLRLVKSLNPKVVTLVEQESNTN
TAAFFPRFLETLDYYTAMFESIDVTLPRDHKERINVEQHCLARDVVNVIACEGPERVERH
EVLGKWKSRFRMAGFSPYPLCSLVNATIKKLLENYSDKYRLEERDGALYLGWMNRDLVAS
CAWK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtcacaacgacctagaaaagtaggcatgccaaatacattcttcctaaatcag
cctctgcagaaggtagagtcctattttctgccccatattcaaacttttgaaccccagttg
agctgtaataacagcagatatgggcctagctgtcccattcagatttctcatgaccgatat
tgtaccctggagtcatcgtcattgacgggcaatcatactatctacaattctccttcaact
gtgagtttttcgccgattgggagccctgtgtcccagcaagaatctttgcacatgacagat
ccagttcagtcaccagaaactaattatggttctcctttgagtgggtcttgcataaccaat
gatgtaaatgaccttaggcacaagctgagggagctagaaaatgcaatgcttggacctgac
tctgacttttttggggcttgtgataatttgttgccaatcaatgaaggtgcacttgaaaac
agttggagacaaatgatcgaggttataccccgaggagatttgaagcagattcttattgcc
tgtgcaaaagcagtagcagataatgatacattgatatcacagtggctaatgtctgaacta
cgccagatggtgtcagtttctggtgaaccaatccagcgtctaggagcctacatgttggaa
ggacttgttgcaaaactggctgcttcaggaagttccatctacaaatctttgagatgcaag
gagcctgcaagcttcgaactcttatcttatatgcacattctttatgaagtttgcccttac
ttcaaatttggatatatgtcagcaaatggtgctattgctgaagcaatgaaggatgaaaac
agagttcacatcattgatttccaaatttctcagggtagtcaatgggtgactctgatacag
gcttttgcagctcggccaggagggccaccacacattcgcataactggtatcgatgattcc
acttcagcttatgcacgtggaggaggattgagtattgtgggacagaggttgtctaggctt
gctgagtcattcaaagtgcctttcgaattccatgctgctgccatgtctggttgtgaagtc
cagcctgaagatctaggaattcaaccaggggaagcactggcagtgaattttgcttttgtg
ctgcaccacatgcctgatgaaagtgtcagcactgaaaatcctcgggatcgactgctaagg
ctggtgaaaagcttgaatcccaaggtggtgactcttgttgaacaagaatcaaatacaaat
actgctgcattttttcctcgtttccttgaaaccttggattactatacagctatgtttgaa
tccattgacgttactcttccaagagatcacaaagagcgaatcaatgttgagcagcactgc
ttggcaagagatgttgtcaacgtaattgcctgtgagggtcctgaaagggtggaaagacat
gaggttcttgggaagtggaaatcacggttcagaatggctggttttagtccatacccctta
tgttccttggttaatgccaccattaaaaaactgctagaaaactactcggacaaatacagg
ctagaagaaagagatggggctctttatcttggttggatgaatagagatttggttgcttct
tgtgcatggaaatga
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