Coffea arabica (coffee): 113690789
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Entry
113690789 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X5
KO
K03504
DNA polymerase delta subunit 3
Organism
carb Coffea arabica (coffee)
Pathway
carb03030
DNA replication
carb03410
Base excision repair
carb03420
Nucleotide excision repair
carb03430
Mismatch repair
carb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113690789
03410 Base excision repair
113690789
03420 Nucleotide excision repair
113690789
03430 Mismatch repair
113690789
03440 Homologous recombination
113690789
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113690789
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113690789
03400 DNA repair and recombination proteins [BR:
carb03400
]
113690789
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113690789
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
113690789
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
113690789
MMR (mismatch excision repair)
DNA polymerase delta complex
113690789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
113690789
NCBI-ProteinID:
XP_027064663
UniProt:
A0A6P6SET0
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All DBs
Position
5c:45773153..45777675
Genome browser
AA seq
547 aa
AA seq
DB search
MFSAEGKLFIGFGSSLPLFGCEIRLPHADPNMAEIETLGILDEIQSLVSDKLQVVSYKWL
SRNFLVSSNDAKRLLQDFVEKRGTGVEVVYTLSGWLKTDPSVYHIRLVSKPKLTEVKQEF
DENCSVQIYSVQACLPKDPAVLWNAEFVQAEELFKQPHEVNNCLRDNRFCGILNSFVKRN
AEEANGTTSVLPVKTTGTSGSSGYTLANQSPTIPQPQQKKIQGTSPNVTLQSPNVVKDVK
NESKPAENKLKVPQLTVNTKKGETDKNSSGTGGALANMWGRASAKSKAECASAKTNGISN
SAAIADAQICAREEIEHESSDDEGQGVNVRRSYNGEVGRKRRVVFDFSDEEDEFKDAVNL
ASPDPPKKKSMLDSKRSSYSSDIEKSKLNFEEEKEDKPNFKHRKETDRKSKEENLAFGNH
NNMNSSSSEKVINQVPAVDTIAKDKTRDAAPNSPKRKKVLKTRIDERGREVTEVVWEGEE
ETKPESDTTKKADNIPASNNSNRPSAVKKSPAVTANAPLNQVGKTGSKKAGNKDPKQGNI
LSFFKRV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgttctctgcggagggaaaattgtttatcggattcggttcatcacttccccttttcggg
tgcgagatccgactgccccacgccgacccgaacatggcagaaattgaaaccctgggtatc
ctcgacgagatacagtccctcgtctccgataagcttcaagtggtgtcatacaaatggctg
agtcgaaattttttggtgtcctcaaacgacgcaaaaaggctgcttcaggattttgttgag
aagcgtgggaccggagtagaggtagtttatactttgtctggctggttgaaaactgatcct
tccgtttatcatatcaggcttgtgtccaagcctaaacttacagaagtaaagcaagaattt
gatgagaattgctcagttcaaatctatagcgtgcaagcttgcttaccaaaagacccagca
gtcctttggaatgctgaatttgtccaagcagaagagctctttaagcagccccatgaagtt
aataattgtctgcgagataacagattttgtggaatactaaattcctttgtcaagagaaat
gctgaagaagcaaatggaaccacaagtgtgctaccagtgaaaactaccgggacctcaggg
tcatctggatacaccttggccaaccagagtccaacaattccacaaccgcagcagaaaaag
attcagggaacaagccctaatgtcacattgcaatcccccaatgtggtcaaagatgttaaa
aatgagagtaagcctgctgagaacaaactgaaagttcctcaattgactgttaatacgaaa
aaaggagagactgataagaactcttctggaactggaggcgcattggctaatatgtggggt
cgtgcatctgcaaagtccaaagctgagtgcgcctctgcaaaaactaatggcatatcaaat
tctgcagcaattgcagatgcacaaatatgtgctcgtgaagaaatagagcatgaaagcagt
gatgatgaaggtcaaggtgtcaatgtcaggcggtcgtacaatggcgaagttggtcggaag
aggagggttgtttttgacttctcagacgaagaagacgaattcaaagatgctgtcaatcta
gcatccccagatcctccaaagaagaaatcaatgctggattcaaaacgaagctcttattct
tcagacattgagaagagcaagttgaattttgaggaagagaaggaagataaaccaaatttc
aagcatagaaaagaaaccgacagaaaatcaaaggaagagaatctagcgttcggcaaccac
aacaacatgaactcttcttcttcagagaaggttataaaccaagtgcctgctgttgacaca
attgcgaaggataaaacaagggatgctgctccaaattcacctaaaaggaaaaaagtacta
aaaacaaggattgatgagcgtggaagagaagtaactgaggttgtttgggagggtgaggag
gagacaaagcctgagagtgacacgacaaagaaggctgacaacattccagccagcaacaat
tctaacagaccatctgctgttaagaagtcaccagctgtaactgctaatgctccattaaac
caagttggcaaaacaggaagtaagaaagcagggaacaaggatcctaaacaagggaatatt
ctgtcttttttcaagagggtttaa
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