Coffea arabica (coffee): 113690836
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Entry
113690836 CDS
T11342
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
carb Coffea arabica (coffee)
Pathway
carb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113690836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113690836
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113690836
Hops complex
113690836
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GFIT
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NCBI-GeneID:
113690836
NCBI-ProteinID:
XP_027064710
UniProt:
A0A6P6SEZ2
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Position
5c:44757951..44766228
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AA seq
840 aa
AA seq
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MAAVSVAAEWQLLYNRYYRKPELYQMQWKHVDLTRNKVACAPFGGPIAAIRDDAKIVQLY
SESALRKLRIFNSAGVQISETVWRNAGGRLIGMAWSDDLKLICITQDGTVYCYSFHAELI
KTLSLGQDGLKHSIVECVFWGNGVVCINEAVELYCIPDFNNPSPIRLADTGLEDMPLCMA
VIEPQYTMSGNVEVLLGVSDSVMVVEEDGVQQTGAEIGPIQKMVVSRNGKLIASFTHDGR
LLVLSSDFSNIIFEYTCESALPPEQLAWCGMDSVLLYWDDMLLMVGPYGDPVRHLYDEPI
VLIPECDGVRILSNTNMEFLQRVPDSTVSIFQIGSTQPAALLYDALDHFDRRSAKADENL
RLIRSSLPGAVEACIDAASHEFDISQQRALLRSASYGQAFCSQFQRNRIRDTSRTLRVLN
AVRHPDVGIPLSIQQYKLLTPSVLIGRLINAHQHLIALRISEYLGINQEVVIMHWACNKI
TSSLAIPDADLLQILLDKLKLCKGISYAAVAAHADKSGRRKLAAMLVEHEPCSSKQVPLL
LRIGEEVTALAKATESGDTDLVYLVLFHIWQKGPTMEFHRTIHARSLARDLFICYARCYN
HEFLKNFFISTGEIQDAAFLMWKESWELAKNPMASRGSPLQGPRIKLIENVQKLFSETRE
HVFESKAAEEHAKLLRMQQELEVTTKQPIFVDSSISDTIRTCIVLGNHRAALKVKTEFKV
SEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIDADEKGEALKYIPKLSD
PRERAEAYARIGMAKEAADAASQAKDNELLGRLKLTFSQNAAASSIFDTLRDRLSFQGVS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtctcagtggcggcggaatggcagctcctctacaaccgctactaccggaaa
cccgaactgtaccaaatgcaatggaagcatgtggacctcacgcggaacaaggtcgcctgc
gcacccttcggcggtcctatcgcagctatccgcgacgacgccaaaatcgtccagctctac
tccgaatccgccctccggaaactccgtatcttcaactctgccggcgtccagatctccgaa
actgtctggagaaacgccggcggacggttaattggcatggcgtggtccgacgacttaaaa
ttaatttgcataacccaagatggcaccgtttattgctactccttccacgctgagctcatc
aagaccctatcccttggtcaagacggattaaaacacagcattgtggagtgcgttttctgg
ggaaacggcgtcgtatgcatcaatgaagccgtcgagctctactgcatacccgattttaat
aatccgagcccaataaggctggcggatacgggtttggaagatatgccgttgtgtatggcc
gtgatcgagccacaatatacgatgtcgggaaatgtggaggttttgttaggggtttcggat
tctgtgatggttgtagaggaagatggggtgcagcagactggcgccgaaattgggccaatt
cagaaaatggtggtttccagaaatggaaagcttatagcttccttcactcatgatggaagg
cttcttgtactctcctcggatttttccaacattattttcgagtacacttgtgagtcagca
ttgcctcctgagcagttagcttggtgtggaatggatagcgtgttgctttactgggatgat
atgcttttgatggttggtccttatggagatccagttcgccacctttatgatgaaccgatt
gtgcttattccggaatgtgatggtgtgaggatactttccaatactaatatggagttcctg
caacgtgttccggattctactgtatccatttttcaaatcggtagtacacagcctgctgct
ttactatatgatgccttggatcactttgaccgccgaagtgctaaggcagatgaaaatttg
agacttattcgctcttcgttgcctggggctgttgaagcttgtatagatgctgcaagtcat
gaatttgatatttcacaacaacgagcgttactcagatctgcaagctatggccaagccttt
tgcagccaatttcagcgcaatcgcatccgtgatacgtctagaactttacgagttctgaat
gctgtacgccaccctgatgtcgggattccactcagtattcaacagtataagttgcttaca
ccatcagttctgattggacgtctgattaatgctcatcagcaccttatagctttgcggata
tcagaatatttagggataaatcaagaagtcgtcatcatgcattgggcgtgtaacaaaata
acttcttcattggcaatccccgatgctgatctccttcaaatcttgctcgataagttgaag
ttgtgcaaaggtatatcttatgcggcagttgctgcccatgctgataagagtggccgcagg
aaattagccgccatgctagttgaacacgaaccttgttcctccaagcaggttcctctcttg
cttaggatcggagaagaagttactgctctagccaaggcaactgaaagtggagatactgat
cttgtttatcttgtcctgtttcatatctggcagaagggaccaactatggagtttcataga
acaatacatgccaggtcactggcacgtgatttattcatatgctatgcaaggtgctataac
catgaattcctgaagaattttttcatatcgactggagaaattcaggatgcggcttttcta
atgtggaaagagtcatgggaattggcaaagaacccaatggcaagcaggggatctcccctt
cagggtcctcggataaagctcattgagaatgtgcagaaacttttctctgaaaccagggaa
catgtttttgagtcaaaggcagctgaagagcatgcaaagttgttgaggatgcaacaagag
ttggaggtcaccacaaagcagcctatttttgtggattcaagcatcagtgatacaattcga
acatgtattgtactgggaaatcatcgggctgctctgaaagttaaaacagaatttaaggtt
tcggagaagcgttggtattggcttaaagtatttgctttggcaacaatcagggattgggat
gctctggagaaattctcaaaggagaaaagaccacccattggctatcgaccatttgtggag
gcatgtattgatgctgatgagaaaggtgaagctcttaaatacataccaaagctgtctgat
cctagggagagagctgaggcttatgctcgaattggaatggcaaaggaagctgctgatgct
gcatctcaggctaaggataatgaattactaggtcgattgaaattgaccttctcgcagaat
gcagcagcttcatcaatatttgatacccttcgagatcggttgtccttccagggggtttct
tag
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