Coffea arabica (coffee): 113690907
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Entry
113690907 CDS
T11342
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113690907
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113690907
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113690907
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
113690907
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113690907
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113690907
Prokaryotic type
113690907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
113690907
NCBI-ProteinID:
XP_027064831
UniProt:
A0A6P6SGB1
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All DBs
Position
5c:17712580..17722866
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AA seq
723 aa
AA seq
DB search
MMRDLLNCPQPPPQLRATPPKSYRTPRKATNKPSSMVASLPHRMASSLYSSLNPLLTPSL
RLLSNPLPVFSSSIPRSTETVINFSSFSRTSSSKSGEICGTKRNGVPLSWALATDSSGST
AAAVSTEEGKKDGVSSSEGRVVLPTNESSEILLRIRHTCAHVMAMAVQRLYPDAKVTIGP
WIENGFYYDFDMEPLTDKDLKKIKKEMDCIIGQNLPLIREEVSRDEAQRRILAVNEPYKI
EILESIKEEPITIYHIGNEWWDLCAGPHVESTGNIRRKAVQLESVAGAYWRGDTNKPMLQ
RIYGTAWEDEEQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAVVRH
IIEDAWKKIHIQRGYDLLYTPHVAKADLWKISGHLDFYKENMFDQMEIEEELYQLRPMNC
PYHILVYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEHQIK
DEIRGVLDLTEEILLQFGFDKYEVNLSTRPDKAVGNDDIWVKATSALKDALNDKRWSYQI
DEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSDQEKKQPLMIHRAV
LGSLERFFGVLIEHYAGDFPLWLSPTQARILPVTDAQLEYCNEIWRRLKANGLRTEICSG
ERLPKLIRNAEKQKIPLMAVVGPKEAETQTVTVRSRHGGELGTMPIDEFITRIKCAVESR
TFL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtgatttgcttaattgcccccaacctccaccacagctaagagccacaccacca
aaatcctaccgaacaccaagaaaagccaccaacaaaccatcctcaatggtggcttctctc
ccccaccgcatggcgtcatcattgtactcctccttgaaccctctactaaccccttctctc
cgactcctgtcgaacccacttcccgttttctcctcctctatcccacggagcacagaaact
gtaatcaatttttcatctttcagtaggacttctagcagtaaaagtggtgaaatttgtgga
accaagaggaatggagttcccctatcctgggctttggcgactgattcttcgggctccact
gctgctgctgtgtctacagaagaagggaaaaaggatggggtttcatcttctgagggcaga
gtcgtgcttccaactaacgaatcatcagagatactgctaagaattcggcatacatgtgca
catgtgatggctatggctgttcaaaggctctacccagatgcaaaagtgacaattggtcca
tggattgaaaatggtttttactatgactttgatatggagccattaactgacaaggacctc
aagaaaatcaagaaggaaatggattgtatcattgggcaaaacttaccactaattagagaa
gaagttagccgagatgaagctcaaagaaggatacttgctgtcaatgaaccttacaagata
gaaatcttggaaagcattaaggaggaacctatcaccatatatcatattggcaatgaatgg
tgggatctttgtgctgggcctcatgttgaatcgacaggaaatattagaaggaaagctgtt
caacttgaatcagttgccggtgcctactggagaggagacacaaataagccaatgctacaa
aggatctatggtacagcatgggaagatgaagaacaattgaaagcataccttcattttaaa
gaagaagcaaaacgccgggatcaccggcgaattggacaagatcttgatctgttctctata
caggatgaagcgggtggagggttagtgttctggcatcccaagggtgctgttgtaaggcat
attatagaagatgcgtggaagaagattcatattcaacgtggttatgatctactttacact
ccacatgtggcaaaggcagatctatggaagatcagtggtcatctggatttctacaaagaa
aatatgtttgatcagatggagattgaggaagaactttatcagcttcggccaatgaattgc
ccttaccatatacttgtttacaaaaggaagttacactcgtacagggattttccaatcagg
gttgcagagcttggaacggtatatagatatgaattatctggtagcttgcatggcctgttc
cgtgtgagaggttttacccaggatgatgcacacatattttgtttagaacatcaaataaaa
gatgaaattaggggtgtactggatcttactgaggaaatattgctgcaatttggttttgat
aagtacgaagtaaacctttccacaaggccagacaaagctgtgggaaacgatgatatatgg
gtgaaagcaacctctgccttgaaggatgctttaaatgataaaagatggagctatcagatt
gacgaaggtggtggtgctttctatggtccaaagattgatctcaaaattgaggatgctctt
ggaaggaagtggcaatgctcaaccatacaggtggattttaatttaccccagcgttttgac
attacctatgttgattcggaccaagagaagaagcagcccctcatgattcatcgtgcagtt
ctgggatccttggagcggttttttggagttctcatagagcattatgctggtgatttcccc
ttgtggctttctcctacccaagctcggatattaccagtcacagatgcacagcttgaatac
tgcaacgagatatggaggagattgaaagctaacggtcttcggactgaaatctgcagtggg
gagcgtttgcctaagcttattagaaatgcagagaagcagaaaatcccattgatggctgtt
gttggccccaaagaggcagaaacacaaactgtaactgttaggtctaggcatggcggggag
ttggggactatgccaattgatgaatttatcacccgaatcaagtgtgcagttgagagcaga
acattcctctga
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