Coffea arabica (coffee): 113691015
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Entry
113691015 CDS
T11342
Name
(RefSeq) chitin-inducible gibberellin-responsive protein 1
KO
K27748
scarecrow-like transcription factor PAT
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113691015
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
GRAS
113691015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
113691015
NCBI-ProteinID:
XP_027064982
UniProt:
A0A6P6SHI3
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Position
5e
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AA seq
585 aa
AA seq
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MDSHQFFGYSVAGADISYPSYSTAPSVPNRLYGSLKFELRNSPNSPFLSHFDSETLTTQS
DGQEQHSSTENLSEASPSCNSSLNYTSSCYQQLSSSPDSSQEKPQISSGGTTLFQNPNNG
HNIKYTLQQLETALMGPDEEATTSAPSVGENKRPQASGQKSRAWSQENQPLGSQLIHSQP
SYALHLGKSGNELPMEKRLRAIEELSLKGIPPTNLKQLLMECARAFYENELENFEKLVET
ARGAVSITGEPIQRLGAYMLEGLIARKEASGTNIYRTLRCKEPEGKDLLSYMHILYEICP
YLKFGYMAANGAIAEACRNEDRIHIVDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDD
PVSQYARGEGLAAVGKRLAAISEKFNIPVEFHAVPVFAPEVTRDMLCIRPGEALAVNFPL
QLHHTPDESVDVTNPRDGLLRMVKALNPKVVTLVEQESKTNTAPFLPRFWETLEYYSAIF
ESIDVTMPRDRKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFRQYP
LSSYVNSVIRGLLRCYSEHYTLVEADGAMLLGWKDRNLISASAWH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggattcacatcaattttttggatatagcgttgctggtgcagacatatcatacccttct
tattccactgccccttcagtgccaaatagactctacggctcactgaaatttgagttaagg
aactcacctaattcacctttcttgtctcattttgattctgagactcttaccacacagagt
gacggtcaagaacagcatagttcaacagaaaatctttctgaagccagtccatcctgtaat
tcttcattaaattataccagtagttgctaccagcagttaagctcatctccggattccagt
caagaaaaacctcaaatctcttctggtggaactactctttttcagaatccaaataatggt
cataacataaagtacactttgcagcaactggagactgctctaatgggaccagatgaagaa
gcaacaacatcagctccctctgtaggggaaaataaacgcccacaagcatcaggccagaaa
tccagggcctggagccaggaaaatcaacccctgggatcgcaattaattcattcccagccg
tcttatgccttgcacctggggaaatcaggaaatgaacttcctatggagaagcgtctgaga
gcgattgaagaattgtccctgaagggtatccctccaactaatcttaaacaattgttgatg
gaatgtgctcgagcattttatgaaaatgagctagagaactttgagaaattggttgaaaca
gcacgtggtgctgtaagcatcactggtgagccaattcagcgtcttggtgcttacatgctt
gaagggctaatagcaaggaaagaggcatcgggaaccaacatttaccggactctgagatgc
aaggagccagaaggcaaggacttgctttcatacatgcatattctgtatgaaatatgtcct
tacttgaaatttggctatatggctgcaaatggtgccattgcagaagcatgtagaaacgaa
gatcgcatccacattgtggacttccaaattgctcagggcacacaatggatgactctctta
caagcacttgctgcaaggcctagtggtgctcctcatgtgcgtattactggcattgatgac
ccagtttctcagtatgcacgcggagaaggtttggcagcagtaggcaaacgcttggcagcc
atttctgaaaagttcaatattccagtggagttccatgcagtgccagttttcgctccagag
gttacaagggatatgctgtgtataaggcctggtgaagctctggctgtgaacttccccctg
cagctccatcacacacctgatgagagtgttgatgtgaccaatccaagagatgggcttctc
agaatggtgaaggcacttaatcccaaggtcgtcaccctggtggaacaagaatcaaagacg
aatactgctccatttctccccaggttttgggaaactctagaatactattcggcaatattt
gagtcgatagatgtcactatgccaagggacaggaaggagcgaattaatgtggagcaacac
tgtttggccagggatatagtgaatattatagcttgcgaaggaaaggaaagggttgaacgc
catgagctctttggaaagtggaaatccagatttacgatggctgggtttcggcaatatcct
ctgagttcctatgtcaattcagtgataagaggcctgttaaggtgttactcagaacactat
acactagtggaggctgatggcgctatgctgctggggtggaaagacaggaatctgatttct
gcgtctgcttggcactga
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