Coffea arabica (coffee): 113691124
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Entry
113691124 CDS
T11342
Name
(RefSeq) scarecrow-like protein 21
KO
K27748
scarecrow-like transcription factor PAT
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113691124
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
GRAS
113691124
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Paralog
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
113691124
NCBI-ProteinID:
XP_071907492
UniProt:
A0ABM4UJN0
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Position
5c
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AA seq
586 aa
AA seq
DB search
MDSHQFFGYSVAGADISSYPSYSTAPSVPNRLYGSLKFELRNSPNSPFLSHFDSETLTTL
SDGQEQHSSTENLSEASPSCNSSLNYTSSCYQQLSSSPDSSQEKPQISSGGTTLFQNPNN
GHNIKYTLQQLETALMGPDEEATTSAPSVGENKGPQASGQKSRALSQENQPLGSQIIHSQ
PSYALHLRKSGNELPMEKRLRAIEELSLKGIPPTNLKQLLMECARAFYENELENFEKLVE
TARGAVSITGEPIQRLGAYMLEGLIARKEASGTNIYRTLRCKEPEGKDLLSYMHILYEIC
PYLKFGYMAANGAIAEACRNEDRIHIVDFQIAQGTQWMTLLQALAARPSGAPHVRITGID
DPVSQYARGEGLAAVGKRLAAISEKFNIPVEFHAVPVFAPEVTRDMLCIRPGEALAVNFP
LQLHHTPDESVDVTNPRDGLLRMVKALNPKVVTLVEQESKTNTAPFLPRFWETLEYYSAI
FESIDVTMPRDRKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFRQY
PLSSYVNSVIRGLLRCYSEHYTLVEADGAMLLGWKDRNLISASAWH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggattcacatcaattttttggatatagcgttgctggtgcagacatatcatcataccct
tcttattccactgccccttcagtgccaaatagactctacggctcactgaaatttgagtta
aggaactcacctaattcacctttcttgtctcattttgattctgagactcttaccacactg
agtgacggtcaagaacagcatagttcaacagaaaatctttctgaagccagtccatcctgt
aattcttcattaaattataccagtagttgctaccagcagttaagctcatctccagattcc
agtcaagaaaaacctcaaatctcttctggtggaactactctttttcagaatccaaataat
ggtcataacataaagtacactttgcagcaactggagactgctctaatgggaccagatgaa
gaagcaacaacatcagctccctctgtaggggaaaataaaggcccacaagcatcaggccag
aaatccagggccttgagccaggaaaatcaacccctgggatcgcaaataattcattcccag
ccgtcttatgccttgcacctgaggaaatcaggaaatgaacttcctatggagaagcgtctg
agagcgattgaagaattgtccctgaagggtatccctccaactaatcttaaacaattgttg
atggaatgtgctcgagcattttatgaaaatgagctagagaactttgagaaattggttgaa
acagcacgtggtgctgtaagcatcactggtgagccaattcagcgtcttggtgcttacatg
cttgaagggctaatagcaaggaaagaggcatcgggaaccaacatttaccggactctgaga
tgcaaggagccagaaggcaaggacttgctttcatacatgcatattctgtatgaaatatgt
ccttacttgaaatttggctacatggctgcaaatggtgccattgcagaagcatgtagaaac
gaagatcgcatccacattgtggacttccaaattgctcagggcacacaatggatgactctc
ttacaagcacttgctgcaaggcctagtggtgctcctcatgtgcgtattactggcattgat
gacccagtttctcagtatgcacgcggagaaggtttggcagcagtaggcaagcgtttagca
gccatttctgaaaagttcaatattccagtggagttccatgcagtgccagttttcgctcca
gaggttacaagggatatgctgtgtataaggcctggtgaagctctggctgtgaacttcccc
ctgcagctccatcacacacctgatgagagtgttgatgtgaccaatccaagagatgggctt
ctcagaatggtgaaggcacttaatcccaaggtcgtcaccctggtggaacaagaatcaaag
acgaatactgctccatttctccccaggttttgggaaactctagaatactattcggcaata
tttgagtcgatagatgtcactatgccaagggacaggaaggagcgaattaatgtggagcaa
cactgtttggccagggatatagtgaatattatagcttgcgaaggaaaggaaagggttgaa
cgccatgagctctttggaaagtggaaatccagatttacgatggctgggtttcggcaatat
cctctgagttcttatgtcaattcagtgataagaggcctgttaaggtgttactcagaacac
tatacactagtggaggctgatggcgctatgctgttggggtggaaagacaggaatctgatt
tctgcgtctgcttggcactga
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