KEGG   Coffea arabica (coffee): 113691132
Entry
113691132         CDS       T11342                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X3
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
carb  Coffea arabica (coffee)
Pathway
carb04144  Endocytosis
carb04517  IgSF CAM signaling
carb05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:carb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    113691132
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113691132
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113691132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    113691132
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:carb04812]
    113691132
Membrane trafficking [BR:carb04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    113691132
Cytoskeleton proteins [BR:carb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     113691132
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Tricorn_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd RMC1_N WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_NUP159_NUP214 eIF2A BNR_3 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 113691132
NCBI-ProteinID: XP_027065147
UniProt: A0A6P6SHX7
LinkDB
Position
5c:44226355..44234805
AA seq 378 aa
MAAVSVYKFADCVTCHAWSPDLSMIALCPNNDEVHIYRRSEEEKWERIHVLQKHDQIVSG
IDWSSRSNKIVTVSHDRNSYVWNQETTEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
KTVCVCYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNIFLATTSTDGKCRVFSTFIKGVD
TREAGLGPSDSKFGEQIVQLDLSFCWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QSVAFRDLPLRDVLYLSERVVIGVGFDCNPMVFVADESGLWGFLRFLGERKAAASSAKSG
SQFSEAFGKLYGQSRYGISNDSVQPSRLHGGIHENCINCIVPLNRKVGSKVTRFSTSGLD
GRVVIWDLQNQEDLLDYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggctgcagtttcagtgtataaatttgctgattgcgttacttgccatgcttggagccct
gacctatccatgattgcgctttgtccaaacaatgatgaagtgcatatctatagaagatct
gaggaggagaagtgggaaaggatccatgtccttcagaagcatgatcagatcgtttctggg
attgattggagttcaaggtcaaacaagatagttactgtatctcatgatcggaattcatat
gtttggaaccaagaaacaacagaatgggtgcccactcttgttatccttaggctaaatcgt
gctgcactttgtgtgcagtggagtccaaaagagaataagtttgcagttggaagtggggct
aaaactgtttgtgtgtgctactatgagcaggagaataactggtgggttagtaagcttatc
aggaagaagcatgattcatccgttactagtgttgcctggcaccccaataacatattcctt
gcaaccacatctactgatggaaaatgccgagtattttctactttcattaaaggcgttgac
acaagggaagcgggtttaggtccttcagattctaaatttggagagcaaattgttcaactt
gatctctcattttgctgggcttttggtgtcaaatggtccccaagtggcaatactttagcc
tatgtaggtcataactcaatgatctactttgttgatgatgttggaccctctcctttagct
caaagtgttgcattccgtgatttgcctcttcgtgatgttttgtatctttctgaaagagtg
gtgattggtgtgggatttgattgcaatccaatggtttttgtagcagatgaaagtggactg
tggggttttctgaggttccttggtgaaagaaaagcagcagcttcaagcgcaaaatctggt
tcacagttttctgaagcatttggaaaactctatggccaatcaagatatggaattagcaac
gatagtgttcaaccttcaaggctgcatggtggcattcatgagaactgcatcaattgtatt
gtaccattaaataggaaagtgggttcaaaagtaaccaggtttagcacctcagggttggat
ggcagagtagtcatttgggatttgcagaaccaagaagatttattagactatttatga

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