KEGG   Coffea arabica (coffee): 113691132
Entry
113691132         CDS       T11342                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X3
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
carb  Coffea arabica (coffee)
Pathway
carb04144  Endocytosis
carb04517  IgSF CAM signaling
carb04519  Cadherin signaling
carb05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:carb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    113691132
   04519 Cadherin signaling
    113691132
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113691132
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113691132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:carb04131]
    113691132
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:carb04812]
    113691132
Membrane trafficking [BR:carb04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    113691132
Cytoskeleton proteins [BR:carb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     113691132
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Tricorn_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd RMC1_N WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_NUP159_NUP214 eIF2A BNR_3 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 113691132
NCBI-ProteinID: XP_027065147
UniProt: A0A6P6SHX7
LinkDB
Position
5c:44226355..44234805
AA seq 378 aa
MAAVSVYKFADCVTCHAWSPDLSMIALCPNNDEVHIYRRSEEEKWERIHVLQKHDQIVSG
IDWSSRSNKIVTVSHDRNSYVWNQETTEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
KTVCVCYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNIFLATTSTDGKCRVFSTFIKGVD
TREAGLGPSDSKFGEQIVQLDLSFCWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QSVAFRDLPLRDVLYLSERVVIGVGFDCNPMVFVADESGLWGFLRFLGERKAAASSAKSG
SQFSEAFGKLYGQSRYGISNDSVQPSRLHGGIHENCINCIVPLNRKVGSKVTRFSTSGLD
GRVVIWDLQNQEDLLDYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggctgcagtttcagtgtataaatttgctgattgcgttacttgccatgcttggagccct
gacctatccatgattgcgctttgtccaaacaatgatgaagtgcatatctatagaagatct
gaggaggagaagtgggaaaggatccatgtccttcagaagcatgatcagatcgtttctggg
attgattggagttcaaggtcaaacaagatagttactgtatctcatgatcggaattcatat
gtttggaaccaagaaacaacagaatgggtgcccactcttgttatccttaggctaaatcgt
gctgcactttgtgtgcagtggagtccaaaagagaataagtttgcagttggaagtggggct
aaaactgtttgtgtgtgctactatgagcaggagaataactggtgggttagtaagcttatc
aggaagaagcatgattcatccgttactagtgttgcctggcaccccaataacatattcctt
gcaaccacatctactgatggaaaatgccgagtattttctactttcattaaaggcgttgac
acaagggaagcgggtttaggtccttcagattctaaatttggagagcaaattgttcaactt
gatctctcattttgctgggcttttggtgtcaaatggtccccaagtggcaatactttagcc
tatgtaggtcataactcaatgatctactttgttgatgatgttggaccctctcctttagct
caaagtgttgcattccgtgatttgcctcttcgtgatgttttgtatctttctgaaagagtg
gtgattggtgtgggatttgattgcaatccaatggtttttgtagcagatgaaagtggactg
tggggttttctgaggttccttggtgaaagaaaagcagcagcttcaagcgcaaaatctggt
tcacagttttctgaagcatttggaaaactctatggccaatcaagatatggaattagcaac
gatagtgttcaaccttcaaggctgcatggtggcattcatgagaactgcatcaattgtatt
gtaccattaaataggaaagtgggttcaaaagtaaccaggtttagcacctcagggttggat
ggcagagtagtcatttgggatttgcagaaccaagaagatttattagactatttatga

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