Coffea arabica (coffee): 113691610
Help
Entry
113691610 CDS
T11342
Name
(RefSeq) vacuolar protein sorting-associated protein 9A
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
carb Coffea arabica (coffee)
Pathway
carb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113691610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113691610
Membrane trafficking [BR:
carb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113691610
Protein recycling
Other Rab GTPase associated proteins
113691610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
113691610
NCBI-ProteinID:
XP_027065635
UniProt:
A0A6P6SIJ6
LinkDB
All DBs
Position
6c
Genome browser
AA seq
485 aa
AA seq
DB search
METATSDAFGSSTAPLTWHDFLERMRHPSAAPFVKDIKSFIVSFMNNAPDGERDSAAVQE
FLGNMETAFRAHTLWAGSSEEELESAGEGLEKYVMTKLFPRVFASLPEDVQADDQLYEKI
ALVQQFIQPENLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVISNLLLN
ASIAAKENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVSEAAYFFTNMLS
AESFVMNIDAKALSMDETEFQKNMEYAHTLLSGLSGASDNLPGQSDQRVGPVNPREGLNH
NKQQVSTIQNQSSLESSDTKSRNEEPYVKDQLSKIPSISDLENKGANMLLKEDKLKQEFQ
DFPYLYSRVGDLTVGDVEDLLNSYKQLVFKYVSLSKGLGLTTLLHPSSTEQQKEQHEAIS
MEGHKGTREEKSIEEKSIDESSKDFSQTAGDLNESCSVVENAESMLSEDEAVSSQTDGGD
EISQR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagacggccacctccgatgccttcggatcatcgacggcaccgttgacgtggcacgac
ttcctcgagagaatgcgtcatccttccgctgccccgtttgtcaaagacattaaaagcttt
atagtgtcatttatgaacaatgcgccggatggggaaagggatagtgcagctgtgcaagaa
tttcttggcaatatggaaactgcattcagggctcatacactttgggctggttcttcagag
gaggaattggagagtgctggtgagggattggagaaatatgttatgacaaaattatttcca
cgtgtatttgcttcacttccagaagatgtacaagctgatgatcaactttatgaaaagatt
gctttagttcaacagttcattcagccagagaatttggatatcaagccaaccttccaaaat
gaaacttcatggttgcttgctcagaaggaactacagaagattaatatgtacaaagcacca
agagacaaacttgtttgcatcctgaattgttgcaaggttattagtaatctactgctaaat
gcctctattgcggcaaaagaaaatcctcctggagctgatgaatttcttcctgttctcatt
tatgtcactataaaggcaaatcctccacaactgcattccaacttattgtatatccaacga
tataggcgccaaagtcgtttggtctctgaagcggcctactttttcactaacatgctttca
gcagagtcatttgttatgaatatcgatgcaaaagcactttcaatggatgaaactgaattt
cagaagaatatggaatatgcacatacacttctttcaggattgtcaggggcctcggacaat
ctgcctgggcaaagtgatcaaagggttggacctgtgaaccctagagaaggtttgaatcat
aacaagcagcaagtctcgacaatacaaaatcagtcctcactcgaatcatctgacactaag
tccaggaatgaagagccgtatgtgaaagatcagttgtctaaaattccatcaatctcagac
ctggaaaataaaggagcaaacatgcttttgaaggaggataaactgaagcaagaatttcag
gatttcccatatttgtattctcgggtcggtgatctgacagtaggcgacgttgaagacctg
ctgaacagctacaagcagcttgttttcaagtatgtctctctttctaaaggcttaggtctg
acaactctgcttcatccttcatccacagagcaacagaaagaacagcatgaagccatatct
atggaagggcataaagggacaagagaagaaaagtcgattgaagaaaaatcaattgatgag
tcatcaaaggacttttctcagactgctggagatttgaatgaatcatgttctgtggttgag
aatgctgaatccatgttgtctgaagatgaagctgtttccagtcaaactgacggaggggat
gaaatatcccagagatag
DBGET
integrated database retrieval system
