Coffea arabica (coffee): 113691620
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Entry
113691620 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113691620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113691620
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113691620
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113691620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
113691620
NCBI-ProteinID:
XP_027065646
UniProt:
A0A6P6SIK7
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All DBs
Position
6c
Genome browser
AA seq
372 aa
AA seq
DB search
MVKTHLFSAFSTTTLTSRLLLLTLVFSFFILVSFVFDFGESITIKFRFLLLAKRNRFQFR
VGLKKMAPGGGAFREDVDSLPKATNYDIAIVKAEKSSSSVKPKIGLSEKHGISSMNGVHE
LLQCPVCGSSMYPPIHQCPNGHTLCANCKVRVHNSCPTCRFDLGDIRCLALERVAESLEL
PCQYQGLGCHDIFPYYSKLKHEQNCRFRPYNCPYAGSECSITGDIPTLVAHLKDEHKVDM
HDGCTFNHRYVKSNPHEVENATWMLTVFNCYGKQFCLHFEAFQIGMAPVYMAFLRFMGED
SEARKYSYALEVGGYGRKLTWQGVPRSIRDSHKKVRDSQDGLIIPRALALFFSGGDGQEL
KLRVTGRIWKEL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaacacatttgttttcagcttttagtactactacgctaacaagtcgtcttctt
cttcttactcttgttttttcgttttttattctcgtttcttttgttttcgattttggagaa
tctataactataaagtttcgatttttgttgctggcgaaaagaaatcgattccaatttcga
gtaggtttaaagaaaatggctcctggaggtggcgctttcagagaagatgttgactcactc
ccaaaggccacaaattatgacattgcaatagtcaaggcagagaaaagtagcagttcagtt
aaacctaagattggccttagtgaaaagcatggaatatcttcaatgaatggtgtgcatgaa
cttcttcagtgtcctgtttgcggaagttcgatgtaccccccaattcatcagtgccccaat
ggacacacactttgtgcaaactgcaaagttagagtccataactcttgcccaacttgccga
tttgatcttggagacataagatgtttggccttggaaagagtggctgaatcattagaactt
ccttgtcagtaccagggtcttggctgtcatgatatatttccatactatagtaagctcaaa
catgagcagaattgtcgattccgtccatacaattgcccttatgctgggtctgagtgctcc
ataactggtgatattccaacactggtagcacatcttaaggatgagcacaaggttgacatg
catgatggttgtacattcaaccatcgatatgtcaaatccaatccacatgaagttgagaat
gcaacatggatgcttacagtcttcaactgttatgggaagcaattttgcttgcactttgag
gctttccagattggtatggcgccagtctacatggccttcctccgattcatgggcgaggac
agcgaggccagaaagtacagctacgcgttggaagttggtggttatggccgtaaattaaca
tggcaaggagttccaaggagcatccgcgacagccacaagaaagttcgcgacagtcaagac
ggactaatcattccaagggccttggcgctcttcttctccggtggagatgggcaagagctc
aagttgagggtgacagggcgcatttggaaagaactctga
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