Coffea arabica (coffee): 113691701
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Entry
113691701 CDS
T11342
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113691701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113691701
Spliceosome [BR:
carb03041
]
Complex B
Other components
Prp19-related factors
113691701
Complex C
113691701
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
113691701
NCBI-ProteinID:
XP_027065769
UniProt:
A0A6P6SIU8
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Position
6c
Genome browser
AA seq
597 aa
AA seq
DB search
MAALKDLLPPVKSSGSTHYDHSNDPWFKQRYSAAESEKSAIIKANPVPPYLKRTGFKPSK
LEDFGDGGAFPEIHIAQYPLDMGRKRDWKPGSKTLPITVDEHGNVRYDAIVRQNENAKKI
VYSQHTDLVPMVVKDGQDEEEMDLDEKQKEIDETTQSTKTALEKIVNVRLSAAQPKNVPT
QSSDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVM
HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA
LYVAEQKAREAVAMRSKVQKEMMMKEKEKKEMELRELARKARSERTGTAAPAAANMPSER
GTDDDMVTDYDRVRDAPREKETKEEREERLQREKIREERRRERERERRLESKDAAMGKKS
KITRDRDRDISEKVALGMATTGRGGEVMYDQRLFNQEKGMDSGFATDDSYNIYDKGLFTA
QPTLSTLYRPKKDVDSDTYGGADEQLEKIMKTERFKPDKAFAGTSERAGPRDRPVEFEKE
AEEADPFGLDQFLTEVKKGKKAMDKVGSSGTMKASAGSMRDGFEGSGRTRIAFDKGR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttaaaggaccttcttccgcctgtaaagtcgagtgggtcaactcactatgat
cactcgaatgatccgtggttcaagcagaggtatagtgcagcagagtctgagaaatctgca
ataattaaggcaaatccagttcctccttatttaaaaagaactggctttaaaccatccaaa
cttgaggattttggtgatgggggggcgttcccggaaattcatatcgctcaataccctctg
gatatggggaggaaaagggactggaagccagggtcgaaaaccttgcccattacagttgat
gagcatggtaatgtgaggtatgatgcaattgtgaggcagaatgagaatgctaaaaagatt
gtgtattcacagcataccgaccttgtccccatggttgtcaaagatggtcaggacgaggag
gagatggacctggatgagaagcagaaggagattgatgagaccactcagagcactaagact
gctcttgagaagattgtgaatgtgaggttgagtgcggctcagcccaaaaatgttcctaca
caatcttcagattctaagtttatcaagtacaagccttcacagcagtcagctgcctttaat
tctggtgcaaaggagaggattattaggatggtggagatgcctgtggaccctttggagcca
cccaagtttaaacataagcgggttccaaaagcatctggttctccacccgttccagtaatg
cactctccacctcggcctgtgactgtgaaggaccagcaagattggaagatcccaccttgt
atttcaaactggaagaacccaaaagggtatacaattcctcttgataagcgtctggcagct
gatggtaggggccttcaggatgttcaaattaatgacaactttgcgaagttatcagaggca
ctgtatgttgcagaacagaaggccagagaggctgtagccatgaggtcaaaggtccaaaag
gaaatgatgatgaaagagaaagaaaagaaagagatggaattgcgtgagttggctcgaaag
gctagatctgagagaactggtactgcagctcctgctgctgccaatatgccttcagagaga
ggtactgatgatgatatggttacagattatgaccgtgtcagggatgccccaagggagaag
gagacaaaagaggaaagagaggagcggttgcagagggagaaaattcgtgaagagcggcgt
agagagagggagagggagcgtaggttggagtcgaaagatgctgcaatggggaagaagagt
aagattacaagggacagagaccgcgatatcagtgagaaagttgctcttggaatggctaca
actgggagagggggtgaagtcatgtacgaccagaggttgtttaaccaggagaaaggaatg
gactctgggtttgccactgatgattcatataacatctatgacaaggggctttttactgcc
cagcctactctgtctactctctacaggcccaaaaaggatgttgactctgatacttatgga
ggtgcggatgagcagctggagaagatcatgaagactgagcgctttaaacctgacaaggca
tttgcaggtacctcagagagggctggtcctagagacaggcctgttgagtttgagaaagag
gctgaagaagctgatccgtttggtttggatcaattcttgactgaagtcaagaaaggtaaa
aaagcaatggataaagttggcagcagtggtacaatgaaagctagtgcaggatcaatgcga
gatggctttgaaggatctggtagaactcgtattgcctttgataaagggcgttga
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