Coffea arabica (coffee): 113691878
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Entry
113691878 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113691878
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
113691878
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
113691878
NCBI-ProteinID:
XP_027066001
UniProt:
A0A6P6SJI7
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Position
6c:complement(17749113..17752510)
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AA seq
257 aa
AA seq
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MEAESWANFSETSDSEGCLDDLNDEENFYASGDIPKLQFRKDVSKARWIDDLEMAEVVER
KGGMWTSTGIVRRGKIYCSIEETLFLAEIGALYLLDEDNTPFPLKYIYNKVQEKKNGFSW
ESFEAYKHLKALGYVVGRHGIPWTMKTDSSAQDSTDVNERVNGESRENFIITEMFHGMDI
NEVRPLFDVYPPNSKFKKSSPGTPCFILCLTSVHPLSKQEIEELERCCHGCPLKFCNVDH
GRVSFFSFNRLELPTLP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaaagctgggccaatttctcggaaacaagtgattctgagggttgcttggat
gacttaaatgatgaggagaatttctatgcatctggtgacatacccaagttgcaatttagg
aaagatgtgtcaaaagcacggtggattgatgatttggaaatggctgaggtggtggagagg
aagggagggatgtggacaagtactggaatagttcgtagaggcaaaatttactgctctatt
gaagaaactttgtttttggctgaaattggagctttgtatcttctggatgaggacaataca
ccctttcctctgaaatatatttataataaagtccaagaaaagaagaatggattctcatgg
gagtcttttgaggcatataaacacttaaaagctcttggttatgttgttgggcggcatggt
ataccttggacaatgaagactgattctagtgcccaagattcaacagatgtaaatgagaga
gtgaatggagagtcaagagagaattttattattactgagatgtttcacggcatggacatt
aatgaagttagaccattatttgatgtttaccctcctaatagcaagtttaagaagtcttct
cctggcaccccatgtttcatcctctgccttacaagtgtccatcctctgtcaaaacaagag
attgaggaacttgagagatgttgtcatggctgccctctaaaattctgtaatgttgatcat
ggacgcgtcagtttcttctcattcaacagattggagcttcctacacttccttga
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