Coffea arabica (coffee): 113691906
Help
Entry
113691906 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
carb Coffea arabica (coffee)
Pathway
carb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113691906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113691906
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113691906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113691906
NCBI-ProteinID:
XP_027066035
UniProt:
A0A6P6SJL6
LinkDB
All DBs
Position
6c
Genome browser
AA seq
302 aa
AA seq
DB search
MAAASGSDLSSEMEVDAFRRLFPLSFHERHLLKSIRPDGRTLGKARDTIISVGAVTSANG
SALTKIGCTTMLAAIKLEVMTPTVESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVVAK
QLSGTILSSGMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLSAVAAFSHLQIPV
VSLNDEGRIVLISEDNGGGKLEKEPVNKEKRKLKLATIPLSLTCILHKNYILADPTAEEE
SIMETLVTVVLDSSSQLVSLYKPGGPVLAQTSAIQDCVALTRQRLKELQKILNEAISDME
VD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccagtggctctgatttatcttcagaaatggaggtggatgcttttagacgt
cttttccctctgagttttcatgagcgccatctgcttaaatctattagacctgatggcagg
acccttggaaaagctagagacacaatcatatccgttggagctgttacatcggcaaatgga
tctgcactaacaaagataggctgtacgaccatgttggctgccattaaattggaggttatg
acacctacagtggagtcaccagatgagggatgcatagctatagattttcatatgccccca
atatgttctcctattgttcggcctgggaggccagcagaggccgctccagttgtggcaaag
cagttatctggcactattttgagttctggcatgattgatttgaaagaattgtctttggtc
agtgggaaagctgcttggatggcttacctggacatatattgtttggatgctgatggttcc
ctttttgatgctgcattgctttctgcagttgctgccttttcacatttgcaaattcctgta
gtttctctgaatgatgagggaagaattgtgcttatttctgaggataatgggggagggaag
ttggagaaggagccagtcaataaagaaaaaaggaagctcaagttggctacaataccattg
tccttaacttgcatacttcacaagaattacatcctggcagatcctacagcagaggaagaa
tccataatggagacacttgtgactgtggtattggattcctccagtcaattggtttctctt
tacaaaccaggtggaccagttcttgcccaaacgtcagctattcaggattgcgttgcatta
acaagacagagactgaaggaacttcaaaagatcttaaatgaagcaatttctgatatggag
gtggactaa
DBGET
integrated database retrieval system
