Coffea arabica (coffee): 113691909
Help
Entry
113691909 CDS
T11342
Name
(RefSeq) heat stress transcription factor A-3 isoform X2
KO
K09419
heat shock transcription factor, other eukaryote
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113691909
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
113691909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
TOP_N
Laminin_II
Motif
Other DBs
NCBI-GeneID:
113691909
NCBI-ProteinID:
XP_027066038
UniProt:
A0A6P6SIY6
LinkDB
All DBs
Position
6c:complement(5019486..5022542)
Genome browser
AA seq
528 aa
AA seq
DB search
MSASTYIYSAYIPLSSFTENPHQNLPSSFRNNFSKNSNPFFFFSFLVAQCIMNPHDRDEN
SVFPSSNSPSSSPPENQSSEVVPLSMVSPFVDLESRQHLQEIVPGILSGGTITTEAARSF
PGMPQPMECLQGTPVPPFLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRN
FKHNNFSSFVRQLNTYGFRKIDADKWEFASESFLRGKRHLLKNIQRRKSPHSHQLGGSSG
STGEAGKIVLEGEVEKLRKERSLMMQEVFELQEQQLGTIQHVEAVNEKLQAAERRQKLMV
SFMAKLFQNPDILDRLKQIKEQKQITSSRTMRKFLKHQPHEPGKAESFLEGQIVKYRTNF
RDLATPSAAPEFDPGAVEQLPEFTLQEPSGGGFSSQGTEDTLLKGKTVVPPEVIPEYFVT
SPDDLAKEKNFPEYSSPDIESMLKEQEPWSMDFEAGAGVSSSSNEIWGNAVNYEIPELMV
SSGLPDIWNLGSLPAAGSSGAEKWPDDESPFSKLDDQVGQHKDESSNF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccagtacctatatatactcagcctacattcctctgtcctctttcaccgaaaac
ccccaccaaaatcttcccagctcgttccgaaacaacttcagcaaaaactcaaatcctttt
ttttttttttcctttttggtagctcagtgtataatgaacccacacgatcgagatgagaat
tcagtctttccttcatcaaattcaccttcctcttccccccctgagaaccagtcttctgaa
gttgtcccgctctcgatggtctctcctttcgtagacttggaatctcgccagcatcttcaa
gaaatcgtaccaggtatcttaagcggaggaactattacgaccgaggctgcccggagtttt
cctgggatgcctcagcctatggagtgtctgcaggggactccagtaccgccatttctctcc
aagacctttgatcttgtggatgaccccgctctggactccataatctcgtggggagccagt
ggacagagcttcgttgtgtgggaccccgtggagtttgccaggagaatattgcccaggaac
ttcaagcacaataatttttccagctttgttcgccaactaaatacttatgggtttcgcaag
attgatgctgacaaatgggagtttgcaagtgagagtttcttaagagggaaaaggcatctg
ctgaagaacattcagaggcgcaaatcccctcactcccatcaacttggtggctcctctgga
tcaactggtgaagcaggcaaaattgtattggaaggggaggtagaaaaattaaggaaagaa
aggagcttaatgatgcaagaagtctttgaattgcaggaacagcagcttggaacaatccag
catgtggaggcagttaatgaaaaactccaggcagcagagcgtaggcagaagttgatggtc
tcatttatggctaagctatttcaaaatccagatatcttggatcgcctgaagcaaataaag
gagcaaaaacaaattacttcttcaagaacaatgagaaagtttctgaaacatcagccacat
gaaccaggtaaagctgaatcatttctggaagggcagattgtgaagtatagaacaaatttt
cgtgatctggccacaccatctgctgcccctgaattcgatccaggtgcagtagaacaactt
cccgaatttactttgcaagaaccaagtggagggggattttcaagtcagggaaccgaagat
acactgctcaaggggaaaactgtagttccaccagaggtgattcctgagtattttgttact
tctcctgatgacttggcaaaggagaagaactttcctgaatactcatcaccggacatcgaa
agtatgctcaaagaacaggaaccatggagcatggattttgaagctggtgctggtgtttct
tcttccagcaatgagatatggggtaatgctgtgaactatgagattccagagctaatggtt
agcagtggattgccagatatctggaatttaggttctctaccagcagccggaagttcaggt
gctgagaagtggccagatgatgaatctcctttctcaaagcttgacgatcaagtcggccag
cataaagatgaaagttctaacttctaa
DBGET
integrated database retrieval system
