Coffea arabica (coffee): 113692078
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Entry
113692078 CDS
T11342
Name
(RefSeq) replication protein A 14 kDa subunit B
KO
K10740
replication factor A3
Organism
carb Coffea arabica (coffee)
Pathway
carb03030
DNA replication
carb03420
Nucleotide excision repair
carb03430
Mismatch repair
carb03440
Homologous recombination
carb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113692078
03420 Nucleotide excision repair
113692078
03430 Mismatch repair
113692078
03440 Homologous recombination
113692078
03460 Fanconi anemia pathway
113692078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113692078
03400 DNA repair and recombination proteins [BR:
carb03400
]
113692078
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113692078
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113692078
MMR (mismatch excision repair)
113692078
DSBR (double strand breaks repair)
HR (homologous recombination)
113692078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
HTH_9
Motif
Other DBs
NCBI-GeneID:
113692078
NCBI-ProteinID:
XP_027066220
UniProt:
A0A6P6SJB6
LinkDB
All DBs
Position
6c
Genome browser
AA seq
107 aa
AA seq
DB search
MDTSSPAVLVNGELLRMHVGKRVRAVIQVLRSDGSGTVTGKSTDGQQIFVKGHPPAPLST
FVEVIGIADSNQSIRADIWTNFGDVFDTQGYNHICQLANGEYKHLFI
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcaagcccagcagtattagtgaacggcgagttactccggatgcacgtcggg
aagcgggtaagagccgtgattcaagtcttacgctccgacggaagcggcaccgtcaccgga
aaatcaacagatgggcaacaaatattcgtgaaagggcatccacctgctcccctttccact
tttgttgaagtcattggtattgctgatagcaatcagtctatccgcgccgatatctggacc
aactttggcgatgtttttgatacccaaggctacaaccatatttgtcagcttgcaaacggg
gagtataaacacttatttatttga
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