Coffea arabica (coffee): 113692407
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Entry
113692407 CDS
T11342
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL2-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113692407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113692407
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
113692407
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
TMEM89
Motif
Other DBs
NCBI-GeneID:
113692407
NCBI-ProteinID:
XP_027066620
UniProt:
A0A6P6SKF5
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All DBs
Position
6c:complement(8829619..8833889)
Genome browser
AA seq
1377 aa
AA seq
DB search
MEDQQEGGNNNNMTKIKRKELGLSCMLNAEVGAVLAVIRRIPEANPQFHHPSEENYDSTI
LQSLKSLRSLIFNAEQEWRKIDPSLYLSPFLDVIQSDDIPAAATGVALSSILKILRLDIF
DEKTPGAKDVMDATVTAITACRLEKTDPVSEEAVMMRILHVLTAVMRHKASVLLTDHAVC
TVVNTCFQVVQQSAHRGNLLQRSARYTMQELIQIIYYRLPDIEVNDWENSESDTEDSNLD
SGFGIRSAVDIFQFLCSLLNVVEIAESEVLHAHTTDGDVQLFALALINSAIELSGDSIGK
HPKLLRMVQDDLFHHLIYYGTYSSPLVLSMICSTVLNIYHFLRRSVRLQLEAFFSFVLFR
AANLGSSPQLQELATEAIVNFCRQSTFIIEVYVNYDCDPIFGNAFEEIGRLLCKHAFPTG
GPLTSLQVQAFEGLVLVIHNIAENIDKEDDTCPSGPYPVEITEYTPFWEEISKDDGLEDW
VTFVRVRKAQKKKLLIAGNHFNQDDKKGLEYLKISHLIPDPPDPKAFALFFRFTPRLDKT
MIGDYLGDPDEFHIQVLNEFTNTFVFTGMILDSALRNYLETFRLPGESQKIHRILEAFSE
RFYDQQSSELFVSKDAVFVLCYSLIMLNTDQHNPQVKKKMTEEEFIRNNREINGGSDLPR
EYLSELFHSISSKAITLFGQSGTPAEMNPMRWIQLVNRAKLMKPYVLCNFDRRLGRDMFA
AIAGPSVATLAAIFEQTEEEEILHECIELLFAIARIAQYELEDNLDELICSFCKFTTLLN
PYASAEETLYAFSNDMKPRMATLAVFTIANTFKNSLRGSWRTIVECLLKLRRLKLLPQSV
VEFEIASDASIGTKHDKNESAASISTRNTKFNHIRRSSGLIGRFSHFLSLESVEESLNLG
VSEFEQNQNIIQQCHIENIFTTSSSLPDESLLNLGRALIYASAGKGQKFSTPVEEEETVA
FCWDLIVIISCVNMHRFSTIWPHYHDYLLGVAQFPLFSPIPFAEKAIVAQMKICLKILSA
YQLDKVSEELIFKSINLMWKLEKEILDTCSEFLVKSVSRILNEYPANLQSSLGWKTVLHL
LSVTGRHPETYDQGVESLINLMSDGMHISRTNYASCIECAFGFVALKNSPVEKNIKIMDL
MSDSVKLLVQWFRSGYSDPGSNVSTGSNASASSTEDNARSGSSASFIMNLFVKLGEALRR
TCLARREEVRNHAVISLQRSFILAEELCFTPANCIYCFNSLIFAMVDDIHEKMLEYSRRE
NAERETRSMEGSLKRAMEVLVEVYSQLLKPISESPHFRPFWMGLLRRMDTCMKVDLGGYG
KSDMQEVIPDLLKRIISIMKENELLIPKEGDDLWEITYVQIQWIAPSLKDELFPGAP
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagcaagaaggaggaaacaacaacaacatgactaagataaaaagaaaggag
ctgggattgtcttgcatgttgaatgctgaggttggagctgttctagctgtgattcgacga
atacctgaagcaaacccccaatttcaccacccttctgaagaaaattatgattccacgata
ctccaatctttaaaatcattaaggtcactcatcttcaatgctgagcaagaatggcggaag
attgatccgtctctctacctgtcaccttttcttgatgtaatacaaagcgatgacattcct
gcagcagcaacgggggtggccctttcatccatcctgaagatcctcaggcttgatatattt
gatgagaagactcctggggctaaagatgttatggatgcaactgtgactgcaatcacggct
tgtcgcctggagaaaactgatcctgtttctgaggaggctgtcatgatgagaattttgcac
gtcttgactgctgttatgaggcataaagcttctgttttgctcactgatcatgcagtttgt
actgtggtcaatacatgctttcaggttgtccaacagtcggcccatcgtggcaacttgctt
cagcgcagtgcaaggtacacaatgcaggaactgatccaaataatatattatcggttgcca
gatattgaggtgaatgattgggagaactctgaatcagatacagaagatagcaatttggat
tcggggtttggaattcgctcggctgtggatatctttcaattcttatgctctttacttaat
gtggttgaaattgcagagtcagaggttttgcatgctcatacaactgatggagacgttcag
ctttttgccttggctttgatcaattctgcgatagaattgagtggtgacagcataggtaag
cacccaaagcttttgaggatggtccaagatgacttatttcaccatttaatatactacggg
acgtactcaagcccactagttttgtcaatgatctgcagtactgttctgaatatctatcac
ttccttcgcaggtccgttcgtctacaattagaagctttcttctcatttgttttgttcaga
gctgcaaatcttggaagctctccccaactccaagaacttgcaactgaagcaatcgtgaat
ttctgtcggcaatctaccttcataatcgaagtctatgtgaattatgattgtgatcctatt
tttgggaatgcgtttgaagaaataggcaggttgctttgcaagcatgcattcccaactggt
ggccctttgacaagtttacaggtccaagcatttgaaggccttgtacttgtcattcataat
attgcagagaacatcgataaggaagatgatacatgcccttctggaccatatccagttgaa
atcactgagtatacacctttctgggaggagatttcaaaagatgatggtctagaggattgg
gtgacttttgttagagtaagaaaggcacaaaagaagaagctactcattgctggaaatcac
ttcaatcaagatgacaagaaagggttggagtatctgaaaatttctcacttaatccctgat
cctcctgatccaaaagctttcgctttgtttttccgtttcaccccaagacttgacaagacc
atgattggggattatcttggtgatcctgatgaattccatattcaagtcctcaatgaattt
acaaatacatttgtatttacaggtatgatattggattcagctttacggaattatttggag
actttcagattaccgggagagtctcagaagattcacagaatacttgaagcattttcagaa
agattttatgatcagcagtcctcggaactttttgtgagcaaggatgccgtgtttgttctt
tgctattctctcatcatgctgaacactgatcaacacaacccgcaagttaagaaaaagatg
acagaagaggaattcatcaggaacaatcgagaaatcaatggcggaagtgatctccctaga
gaatatttatctgagctttttcattctatatcatccaaagcgatcacactctttggtcaa
tcaggtacacctgcagaaatgaatccgatgagatggattcagctagtcaaccgagccaaa
ctcatgaagccatatgtattgtgtaattttgatcgtcgattaggaagagatatgtttgct
gctattgctggaccctcagttgcaactcttgcagcaatttttgagcaaactgaagaagag
gaaattctccatgaatgcattgagttattgtttgcaatagctagaatagctcaatatgaa
ttagaagacaatcttgatgagcttatttgttcgttttgcaaattcactaccttgctcaat
ccttatgcatcagcagaagaaaccctgtatgctttcagcaatgatatgaagccaaggatg
gcgacactcgcagttttcactattgcaaacactttcaaaaattcccttcgagggagttgg
agaactattgttgagtgcttgttgaaactcagaaggctcaagttacttccacaatcggtt
gtcgaatttgaaattgcttcagatgcatctattggaacgaagcatgataaaaatgagtca
gcagcatctatttcaacccgtaatacaaaattcaaccatatacgccgttcctctggctta
attggtcgattttcacacttcttatcattggagagcgtggaagaatctctaaaccttgga
gtcagtgaatttgaacagaatcaaaacattatccagcaatgccatattgaaaacattttc
accaccagttcaagtttacccgatgaatcattactgaatcttgggcgtgctcttatatat
gcatcagctgggaaaggccaaaagttcagcactcccgttgaggaggaagaaactgtggca
ttctgttgggatttgattgtcatcatttcttgtgttaatatgcacagattctcaaccatt
tggcctcactaccatgattatctgcttggagttgcccaatttcctctgttttcaccaatc
ccatttgcagaaaaagccattgtagctcagatgaaaatctgcctcaagatcctttctgca
tatcaacttgataaagtctctgaggaactcatctttaaatccataaatctaatgtggaag
ttggaaaaagaaattcttgacacttgctcagagttcctagtaaagtcggtgagcagaatc
ctgaacgagtaccctgcaaatttgcagagtagcctaggatggaagactgtcctgcatttg
ttgtcagtcactggacgtcatcctgaaacatatgatcaaggagttgagtcactcatcaat
ttgatgtctgatggaatgcacatatcgcggactaactatgcctcctgtattgaatgtgca
tttggttttgttgcactcaagaatagtccagttgaaaagaacataaaaattatggacctc
atgtctgattcagtgaaattgttggttcagtggtttagaagtgggtactcagatccgggt
agcaatgttagtacgggaagcaacgcaagcgcctcttccacggaagacaatgcaagatca
ggcagctctgccagcttcatcatgaacttatttgtcaaactaggtgaagcccttcgacgg
acatgcttagccaggagagaagaagtgagaaaccatgcggtcatttctcttcagagaagc
ttcatcctggctgaggagctgtgttttacaccggcaaactgtatttactgttttaacagc
ttgatctttgccatggttgatgatatacacgagaagatgctggaatattcaaggagggag
aatgcagaaagagaaactcgaagcatggaaggaagtttgaagcgtgcaatggaggtctta
gtggaagtttattcgcagcttttgaaaccgatatcagaaagtcctcattttaggcctttc
tggatgggactgttgcgaagaatggatacgtgcatgaaggtagatttgggagggtatggc
aaatcagatatgcaagaggtaataccggatttactaaaaaggattatctcaataatgaag
gaaaacgagttgttaattcccaaagaaggtgatgacctgtgggagataacctatgttcag
atacagtggattgctccgtcactcaaggacgaactatttcctggtgcaccgtag
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integrated database retrieval system
