Coffea arabica (coffee): 113692468
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Entry
113692468 CDS
T11342
Name
(RefSeq) protein NUCLEOLAR FACTOR 1-like isoform X1
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113692468
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113692468
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
113692468
NCBI-ProteinID:
XP_027066680
UniProt:
A0A6P6SKL3
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Position
6c:50753139..50776740
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AA seq
750 aa
AA seq
DB search
MGKPGFARKRGLKRVNSSKPFKKFKNLKLDPGAEKLVPKQPLENDSEDWSDENSEAELET
KEKEEVEEDIVFNRKPTMYDNLLKRLGSSSQLIANAIKQRKRGEEGKSDTEDDESESEVE
DDNEGSIDESPRRIEMINGAKESGVPGSTEKSEDSGSDDGEIGASDSDEEHDSRTNVESI
TSRSTFSSHLEYKLSQGEVDNLFKRKWNYKWEVPALRAPNCKWRGTGDCFLKDIDMNEMC
GLKPRLYKHWVDVYQGSGGTDFQSSEQRFFFSICNSYRDVLHHNKKPFYLKGQEDSSILD
AYVLHTLNHVLRTRDLISKNDAKVADAQGQGSILNGDGFLDHGFTRPKVLILLPLASIAF
WVVKRLIQLTPSKHKVNIEHMDRFTEEFGSGGVESEEEDEDVENSKRKKSSKPSDFQSLF
GGNNNDHFMIGIKYMGRKIKLYADFYSSDIIVASPLGLITKIGAAEVEKEKDIDYLSSIE
VLIIDHADVILMQNWSHVNTVVEQLNRLPVKQHGTDIMRIRPWYLDGQAQFYRQTIILGS
HLNPDVNSLFNRHCLNYEGKVKLVCLYKGVLPKVLIPVRQIYERFEADSIADVDDARFQY
FCKKVFPKIKDSIQGGIMLCISSYFEFVRLRNFLKSQEASFCLLGEYTKQSDISRGRVWF
FQGQRKIMLYTERAHFYHRYKIRAIQKLIIYSLPERKEFYPEIVNMLEGSQNMSCTVLFS
RFDQFRLERIVGSASAKRMITSEKGVFVFC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccaggatttgcaagaaaaagaggattgaagagagtgaacagttcaaagcca
tttaagaagttcaaaaatctgaagctagatcctggagcagaaaaacttgtacctaagcaa
cctctagaaaatgactcagaggattggtctgatgaaaattctgaggctgaattagaaacc
aaagaaaaagaagaagtagaagaggatattgtttttaacagaaagccaacaatgtatgac
aatttattgaagaggttgggatcaagtagtcaattaattgcaaatgcgattaagcaaaga
aaaagaggagaagaagggaaaagtgatacagaagatgatgaatcagaaagtgaggttgaa
gatgacaatgaagggagtattgatgagtctcctagaagaattgaaatgataaatggtgcc
aaagaaagtggtgtgccgggttctacagaaaagagtgaagattctggatcagatgatgga
gagattggtgcctctgactcagacgaagaacatgattcgagaacaaatgttgaatccatt
accagcagaagtacattcagcagtcacttggaatataaattatctcaaggagaggttgac
aacttattcaagaggaaatggaattacaaatgggaagttcctgctcttcgtgcacccaat
tgcaagtggagaggaactggagactgttttttgaaggacattgacatgaatgaaatgtgt
ggcctcaagccaagattgtataagcattgggtagatgtctaccaaggatctggcggcact
gattttcaatcatctgagcagagattctttttctccatctgcaacagctatcgggatgta
ttacaccataacaagaagcctttttatcttaaaggtcaagaggactcgagtatcctggat
gcttatgttttgcacactttaaatcatgttttgagaacaagggatttgatcagtaaaaat
gatgcaaaagtggctgatgctcaaggacaagggagcattctcaatggtgatggtttcctg
gaccatgggtttactcgtcctaaggtcttgatccttttgcctttagcaagcattgcattt
tgggtagtaaagaggttgatccagttaaccccttcaaagcataaggttaatattgaacac
atggatcgctttactgaggagtttgggagtggaggagttgaaagtgaggaggaggatgag
gatgttgagaactcaaaaagaaagaagtcctctaaaccttctgactttcagtcattgttt
ggtgggaataacaatgatcatttcatgataggcatcaagtatatggggaggaagatcaag
ttatatgctgatttttattcctcagacataatagttgcttcccctcttggtttgatcact
aaaattggcgcggcagaagtagagaaagaaaaggatattgattatctttcctccatagag
gttttgattattgaccacgcagatgtcatactaatgcagaattggtctcatgtgaacaca
gtagttgaacaattaaaccggttacctgtgaagcagcatggaactgatataatgcgcata
cgaccatggtacctagatggacaagcgcaattctatcgacaaacaataattctaggttct
cacttaaacccagacgtcaattcactgttcaatcggcactgccttaactacgagggaaag
gtcaagttggtgtgcctctataaaggtgttcttccaaaagtattgatccctgtacggcag
atatacgagcggtttgaagcagactcgattgcagatgttgatgatgctcgtttccagtat
ttttgtaagaaggtgtttcccaaaataaaagactctatccagggtggaattatgctatgt
attagttcttatttcgagtttgttcgactccgaaattttttgaaatctcaagaagcatcg
ttctgccttcttggagagtacaccaaacaaagtgatatatctcgtgggcgagtttggttc
ttccaaggacagcggaaaatcatgctatacactgagagagctcacttctaccacagatac
aagatccgtgctattcagaaattgatcatttattctcttccggagaggaaagaattttac
cctgagatagtaaatatgctcgaaggatctcaaaacatgtcttgtaccgtgctattttct
cgttttgatcagttccggcttgaaagaattgttggttctgcatctgcaaaaagaatgatt
acatcagagaagggtgtttttgtattctgttag
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