Coffea arabica (coffee): 113692507
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Entry
113692507 CDS
T11342
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113692507
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113692507
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
113692507
NCBI-ProteinID:
XP_027066724
UniProt:
A0A6P6SL81
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Position
11e:47774004..47779964
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AA seq
631 aa
AA seq
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MKDYYHQLEMRNKKESETMAASSSALFLAMRNGEDHIKSKQHHSAGPSSSSAAPPPPDQQ
QRRKRNQPGTPNPEADVIALSPNTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLK
QKTTKEVKRKVYLCPEPTCVHHHPSRALGDLTGIKKHYSRKHGEKKYKCNKCAKKYAVHS
DWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAQESARNPPPLGIGASQLFGSS
SNSSTMSMDMSQIGSQMSAGQDHDHQNQPKADILRLGSARTGVTGQFDNLIGSSMGSALR
PSKSMASSSYFLPETDQEDYHLENHSQHEFFSNKTLHHGLMQFSDLQNNSSASAGSSIFN
LSIFPSSSNAGNLGNNSPNSTSNISSSFLFSNLCNSSHHHHASGSSNGGSSLFSDHLVRQ
HLSSASIPSHYSTSIQSNSISPYMSATALLQKAAQLSSTTSNSTVAFLKSFTSGASSSGT
KPDPDPISSTQFGGIFGDYNTGNHIYEFMSSITGPRSSIFRPFGGAPHEHDYGYSATKLN
FGEQSLRHRSPSFSNLEQASKMQQNLGVRFGGADQGLTRDFLGVGPAGELVRSMSGGGFG
QREHGVEIKPLDSERKTAPESPPFGGGVNFR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactattatcatcagctggagatgaggaacaagaaagaaagtgaaaccatggcg
gcatcttcatcagcactttttctagcaatgaggaatggagaagatcacatcaaaagcaaa
caacaccattctgcaggaccatcttcatcatcagcagcaccaccaccacctgaccaacaa
caaaggaggaaaagaaaccagccaggaaccccaaatccagaagcagatgtcatagcacta
tctcccaacaccctaatggcaacaaacaggtttgtatgtgaggtgtgcaacaaggggttc
caaagggaacaaaatcttcaactgcacagaagaggacataacctcccttggaagcttaag
cagaagactacaaaagaagtgaagcgcaaggtgtatctgtgtcccgagccgacttgcgtg
caccatcacccttcaagggctcttggtgacctcacaggaatcaagaaacactactcaaga
aaacatggtgagaagaagtacaagtgtaacaagtgcgcaaagaagtatgctgttcactct
gactggaaagcccacacaaaaacctgtggtactagggagtacaaatgtgactgtggaact
cttttctcaaggcgggacagtttcatcactcacagagctttttgtgatgcacttgctcaa
gaaagtgcaaggaacccacccccattgggaattggtgcgagccaactatttggtagcagt
agcaacagcagcaccatgagcatggacatgtctcaaattggttcccaaatgtctgcaggg
caagatcatgatcatcagaaccagccaaaggctgatatactacgcctaggaagtgcaagg
actggggtcactgggcaatttgataacctaatcggatcatcaatgggttcggctcttcgc
ccgtcaaaatccatggcttcttctagctacttcttgccagaaactgatcaggaagattat
catctggagaatcattctcaacatgagtttttctctaacaaaactcttcatcatggcctg
atgcaattttctgatcttcagaacaattcaagcgcttcggctgggtcgagtatttttaac
cttagcattttcccaagcagcagcaatgctggtaacttaggcaacaacagtcccaacagc
accagcaacatatcttcgagcttcctgttttcaaacttatgcaacagcagccaccatcat
catgcaagtggaagtagcaatggagggtcgagcttattctctgatcatcttgttcgccag
cacctgagctctgcctccatcccttctcactacagcacttcgattcaaagcaatagcatt
agcccatatatgtcagcaactgccctgcttcaaaaggctgctcaactgagctcaacaacg
agcaactctaccgtggctttcctaaaatccttcacaagcggggcgtcctctagtggcaca
aaacctgatccagaccctattagttcaactcaatttggaggcatatttggcgattacaac
actggaaaccatatctatgagttcatgagttccattaccggtccgaggtcctccattttc
agaccatttggtggagctccacatgagcatgactatggatatagtgctactaagctcaac
tttggtgaacaatctctgagacacagaagcccaagtttctccaacctggaacaagctagt
aaaatgcagcagaatcttggggttaggtttggaggagccgatcaagggctaacaagagac
tttcttggggttggacctgctggagagcttgtgagaagcatgagtggaggagggtttggg
cagagggagcatggagtggagattaagccattggattcagagagaaagactgctcccgaa
agccctccttttgggggaggggtgaattttcgttga
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