Coffea arabica (coffee): 113692585
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Entry
113692585 CDS
T11342
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113692585
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113692585
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113692585
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113692585
03036 Chromosome and associated proteins [BR:
carb03036
]
113692585
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113692585
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113692585
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113692585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113692585
NCBI-ProteinID:
XP_027066808
UniProt:
A0A6P6SLP6
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Position
6c:complement(8503360..8507331)
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AA seq
506 aa
AA seq
DB search
MLKQILAKLPRKSLKSDSLTSVGSDSCNTSPNSDNGIQFTNTCSVISSRLNVVKRKSWAI
FPASIIAGGDLVEPHVPFKDVPNADKQSLFVSKLNLCCLVYDFSDPGKNTKEKDLKHQIL
LELGDFVASGSAKFTESAIAAICKMCAVNLFRDFPPRYHSHVPRGESEEEEPLFDPAWSH
LQLVYDLLLRVLNQNSLDAKLAKKFIDHSFIIRILDLFDSEDPRERDCLKSILHRLYGKF
MMHRPFIRKAVSNIFYRFVFETERHNGIAELLEVFGSVISGFALPLKEEHKVFLSRALIP
LHKPKSLGVYHQQLAYCVVQFVEKEQKLAVMVIQGLLKYWPVTSSQKELMFLSELEELLE
MISMVDFEKIMVPLFRRMSCCLNSSHFQVAERAHFLWNNDHVLNLIAHNRHVIMPMTFSA
LEWNSRNHWNKTVLNLTQNLRKVLSEMDQELALACQNKVEEENSKSSLAAEKRKMTWERL
ETAASCQSIVSSISGVRESASCVVSY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcaaattttagctaaactccctaggaagtcattaaaatctgattcattaacc
tctgttggaagtgattcttgcaacactagtccaaattcagacaacggcatccaatttacc
aacacttgcagcgtgatatcgagtagactgaatgtagtaaagaggaagtcttgggcaatt
tttcctgctagcatcatagctggaggggacttggtcgagcctcatgttccttttaaagat
gttccaaacgctgataaacagagcttattcgtgagtaagttaaatctctgctgtttggta
tatgacttcagcgatccaggcaagaacaccaaggagaaagaccttaaacaccagatatta
ttagaacttggtgattttgttgcttcaggttctgcaaaattcactgaatcagcaattgct
gcaatttgcaaaatgtgcgcggttaacttgttcagagactttccaccccgatatcactct
catgttcctcgtggtgaaagtgaagaagaagaaccattatttgatccagcttggtcccat
ttgcagcttgtctatgatctgcttctccgagtcctgaatcaaaatagtcttgatgcaaag
ctagctaagaagttcattgaccactctttcattataaggatacttgatttatttgactct
gaggatccaagagaaagagattgtttgaaatcaattctgcatcgtctttatggaaagttc
atgatgcacaggccttttatcagaaaggctgtaagcaatatattctaccgatttgttttt
gagactgaacgacataatggaattgctgagctactggaggtatttgggagtgtaataagt
gggtttgctttaccattgaaggaggagcacaaagtgttcctctccagggctttaattcct
ttacataaaccaaaatcactgggtgtctatcatcagcagttggcatactgtgttgtacag
tttgttgaaaaggagcaaaagttggctgtaatggtgatacaggggcttctgaaatactgg
cctgtaacaagtagtcagaaggaattgatgtttttaagtgagttagaagagctattggaa
atgattagcatggtagactttgagaagatcatggtgccgttgtttcggcgtatgtcatgc
tgcctcaacagctcccactttcaggtagctgagagagcacactttttgtggaacaatgat
catgtgcttaatctcattgcacataacagacatgttatcatgcctatgaccttttcagct
ttggaatggaacagccggaaccactggaataaaacagttctaaaccttacacagaattta
aggaaggttttatctgaaatggatcaagaactggcacttgcctgccaaaacaaggtggag
gaggaaaactcaaagtcaagcttggctgctgagaagcggaaaatgacttgggaacgcctt
gaaactgctgctagctgccaatcaatagtcagtagcatttcaggagtcagagaatcagcc
tcttgtgttgttagctactaa
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