Coffea arabica (coffee): 113692694
Help
Entry
113692694 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X2
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00500
Starch and sucrose metabolism
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
113692694
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
113692694
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
113692694
Glycosyltransferases [BR:
carb01003
]
Polysaccharide
Storage polysaccharide
113692694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_transf_4
Glyco_trans_1_4
GT4-conflict
Glyco_trans_4_4
Phage-tail_2
Motif
Other DBs
NCBI-GeneID:
113692694
NCBI-ProteinID:
XP_027066984
UniProt:
A0A6P6SM71
LinkDB
All DBs
Position
6c:62343805..62355148
Genome browser
AA seq
620 aa
AA seq
DB search
MTLGICLPSSFSISPIPKTKGSITSSSIHRCFCRINSYDFVVVNKTNKKKLKPCKNYFLY
SNSCDVKIPAAQIGAAELEDSTTKSGFKNLVWPSPDDEIPFWRREFPTWDVNSDDSVNAE
KDSDLLHIVHATAEMAPIAKVGGLGDVVTGLARACITRGHKVDVMLPFYECIQRQHINNL
VLISTYASYFNGDWIPTNAYRGEVSGISVIFIEPSNHFFKGQSVYGGSYNELEAYLFFSR
ACLEWMQVTGTQPDIIHVHEWQTGALPLLYWDMYQDLSLKKPRIVLTIHNMEHYGECSQE
QLSKCGLDGSVYATEDKAVDDRTIGHNPERLSLLKGGIVYSNAVVTVSPTYLKETLCSGW
LASTLLRNRDKYSGILNGIDSAMWNPATDVFLPAKFDAENFQGKNVCKHFVQRGLGLALE
GTSSGSDRVPLVVCVTRLVAQKGLHLITHAIHRVDELGGQMVVLGRAPDGRVQREFENLA
NLYNQGSGIRILLMYSEELSHMLYAAADMVLVPSMYEPCGLAQMIGMRYGAIPVVRKTGG
LADTVFDIDQGSQPELANGFVFEGIDQGSLNWALDRAFSSYREKPNEWATTLQKVMKVDN
SWNKTAGQYIDLYNTLRVKW
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacactcggaatctgcttgccatcctcattctcaatctccccaataccaaagacaaag
ggtagtattactagcagttctattcatcggtgtttttgtagaatcaactcttatgatttt
gttgttgttaacaagactaataagaagaagttaaagccctgcaagaattacttcttgtat
tcaaattcatgtgatgtcaagatccctgctgctcagattggagctgcagaattggaagac
tcaactactaaatcgggtttcaagaatttagtctggccttctcctgatgacgaaatccca
ttttggcgtagagaattccccacatgggacgtcaactcagatgattctgttaatgcagag
aaggattctgatcttttacacattgttcatgcgacagctgaaatggctcctattgcaaaa
gttggaggtcttggtgatgttgtgactggtcttgctcgtgcttgcataacacgtggtcat
aaagtggatgtcatgcttcctttctatgaatgcatacagaggcaacatattaacaacttg
gtgttgattagtacatatgcttcatatttcaacggagactggatccctactaatgcatat
aggggcgaagtctctggaatctctgtgatttttattgagccatccaaccatttctttaag
ggacagagcgtttatggaggttcatataacgagctagaagcatatttgttcttcagccgt
gcttgtcttgagtggatgcaggtaactggaacacagcctgatatcattcatgtccatgaa
tggcagactggtgcactacccctactttactgggatatgtaccaggatctctcacttaag
aaaccgcgaatagtattgacaattcacaacatggagcattacggagaatgcagccaagag
caactcagtaagtgtggccttgatggatctgtatatgcaactgaagacaaggctgttgac
gatcgtacaattggtcataaccctgagaggttaagcttattgaaaggaggcattgtctac
agcaatgcagttgtcacagtctccccgacatacttaaaagaaacactgtgttctggatgg
cttgctagtaccttgttaaggaaccgtgacaagtactctggtattttaaatggaatagac
tctgcaatgtggaaccctgccactgatgttttcttgcctgctaaatttgatgctgagaac
tttcaagggaagaatgtatgtaaacacttcgttcaaaggggacttggtttggctttggaa
ggcaccagctcaggttctgaccgggtgcctttggttgtctgtgttactcgattggttgct
caaaagggtcttcatttaattacccatgccatccatagggttgatgaacttggcggacag
atggtagtgcttgggagagccccagatggtcgggtacagagagaatttgaaaatcttgca
aatttgtacaaccaaggctccggcattaggattcttttgatgtacagtgaggagctatca
cacatgctttatgcagctgcagacatggtgttggtcccttcgatgtatgaaccatgtggg
ctggctcagatgattggaatgcgttatggggcgatccctgtagttaggaagactggtggt
cttgcagatacagtctttgacatagatcaaggatcacaacctgagttggctaatgggttt
gtctttgaaggaattgatcaaggttccctaaactgggctctggatcgtgcattttcatcc
taccgagaaaaaccaaatgaatgggctacgactctacagaaagtaatgaaggtagataat
agctggaacaagacagcaggacagtacattgatctgtacaacacattaagagtcaagtgg
taa
DBGET
integrated database retrieval system
