Coffea arabica (coffee): 113692695
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Entry
113692695 CDS
T11342
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X2
KO
K07204
regulatory associated protein of mTOR
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113692695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113692695
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
113692695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
HEAT
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT_2
Beta-prop_EML
HEAT_EZ
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_DCAF4
EIF3I
Motif
Other DBs
NCBI-GeneID:
113692695
NCBI-ProteinID:
XP_027066986
UniProt:
A0A6P6SM78
LinkDB
All DBs
Position
6c:1280768..1295998
Genome browser
AA seq
1392 aa
AA seq
DB search
MALGDSMAYRFSQSSMALAVVSNHLEELNVSTSTTGNSSINHEDGERSVRDSETASSSYV
GGAAMTTTSMAYLPQTLVLCELRHDAFEGSLPSGPSDSGLVSKWRPRDRMKTGCVALVLC
LNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGRTLNQQYERWQPRARYKISLDP
TVDEVKKLCTTCRKYAKSERVLFHYNGHGVPKPTVNGEIWLFNKSYTQYIPLPIGDLDSW
LKTPSIYVFDCSAAGMIVNAFVELQDWTAAASASASASSGPSARDCILLAACEAHETLPQ
SAEFPADVFTSCLTTPIKMALRWFCTRSLLRESLDYSLIDRIPGRQTDRKTLLGELNWIF
TAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPLSHPILPPTHQH
HMWDAWDMAAEICLSQLPTLVEDPNAEFQPSPFFTEQLTAFEVWLDHGSDLKKPPEQLPI
VLQVLLSQCHRFRALVLLGRFLDMGSWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIW
TKILALDKSCQVDLVKDGGHAYFIRFLDSVEAYPEQRAMAAFVLAVIVDGHRRGQEACIE
AGLIHVCLRHLQVSSPGDSQTEPLFLQWLCLCLGKLWEDFAEAQTMGVLADASAVLAPLL
SEPQPEVRAAAVFALGTVLDVGFDTSRDGAGGEEDCDDDEKVRFEASIVKNLLNVVSDGS
PLVRAEVAVALARFAFGHNKHLKSVAAAYWKPQPNSVLAALPAFAVKGSGSGYTTPTQYM
PHGSIVPSAVSPLLRVGENSQPVVRDARVFTSSPLATSGILHGSPLSDDSSQHSDSGIVA
DSITNGVVNHARARPLDNALYSQCVLAMCTLAKDPSPRIASLGRRVLSIIGIESVVAKPV
RSTPGNAQPSESMANASTSLTGLARSSSWFDMNGGHLPLTFRTPPVSPPRPSYLTGMRRV
YSLEFRPHLMNSPDSGLADPLLATAGPAGASERSFLPQSTIYNWSCGHFSKPLLTATDDS
EEIIARREEREKLALDRIAKCQHSGGGLTASLPFLLTAVNRLRDQIASWDAKFETGTKTA
LLQPFSPVVVASDESETIRIWNYEESTLLNSFENHDYPDKGISKLCLVNELDESLLLVAS
SDGNVRIWKDYTSKGQQKLVTALSSIQGHRPGVRSVNAVVDWQQQSGCLFASGEVSSIMA
WDLDKEQLVNTIPLSSDCSISALSASHIHGGQFVAGFSDGFVRLYDTRTPEMLVSATQPH
TQRLEKIVGIAFQPGLEPGKIVSASQAGYIQFLDLRHLRDTYLTIDAHRGSLTALAVHRH
APLIASGSAKQLIKIFNLEGEQLGSIRYYPSFMAHKIGSVSSLTFHPYEVLLAAGTADAC
VSIYADATSTAR
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggtgattcgatggcttatagattttcgcaatcatctatggccttggcggtg
gtgtccaatcatctcgaggagttaaatgttagcactagtactaccggtaatagtagcatt
aatcatgaggatggtgagaggagtgttagggattcggaaactgctagtagtagttatgtt
ggtggtgccgcgatgacgacgacaagcatggcctatttgcctcagaccctggtactatgt
gagctccggcatgacgcttttgagggttccttgccctctggcccgtctgacagtggcttg
gtctccaaatggcggcctagggaccggatgaagacgggatgtgttgcccttgttttatgt
ttaaacattagtgttgatccacctgatgtaataaagatatctccttgtgcccggatggag
tgctggattgaccctttttcaatggcacctcaaaaagcgcttgaaacaattggaagaacc
ttaaaccaacagtacgagagatggcagcctagagctcgctacaagatctctttagatccc
actgtggatgaagtcaagaaactttgtacaacttgccgtaaatatgccaagtcagagaga
gttttgtttcactataatgggcatggagttccaaaaccaacggtcaatggagaaatatgg
cttttcaataagagctatacacagtatattccattacctattggtgacttggattcttgg
ctgaagacaccttcaatatatgtctttgactgctctgctgctgggatgattgtcaatgcc
tttgtagagcttcaggactggactgctgctgcttctgcttctgcttctgcttcttctggt
ccttctgctagggattgcattttgcttgcagcctgtgaagcacatgagactcttcctcaa
agtgctgaatttccggctgatgtgtttacttcctgccttacaactcccataaaaatggca
ttgagatggttttgtactcgttctttgcttcgtgagtctctagattattcacttatagat
agaattcctggccggcaaactgatcggaagacgcttcttggagaattgaattggattttt
acagcagtgacagacacaattgcctggaatgttctcccacatgatcttttccagagattg
ttcaggcaagatctattagttgcgagtctgttccgtaactttctacttgcggagagaatc
atgcgctctgccaattgttcaccactttcgcatcccattttgccgccgacccatcaacat
catatgtgggacgcttgggatatggctgctgaaatatgcctttctcagcttccaactctt
gttgaggaccctaatgcagaattccagcctagtccattctttacggagcaattaacagct
tttgaggtgtggcttgatcatggatccgatcttaaaaaaccacctgaacagctgccaatt
gttcttcaggttttacttagtcaatgtcataggttccgtgctttggtgctccttggaagg
tttctggatatgggatcttgggctgtggatttggccttatctgttggaatatttccttac
gttttaaagctcttgcaaacaactactcctgaacttaggcaaattcttgtgttcatttgg
acaaagattcttgcgcttgataagtcttgccaggttgatctcgtgaaggatggtggacat
gcatatttcattagatttcttgacagtgttgaagcttacccagagcaacgtgcaatggct
gcatttgttttggctgtcattgtagatggtcacagacgaggtcaggaggcctgtattgaa
gctggtttgatacatgtatgcttgaggcaccttcaggtttcaagtccaggtgattcacaa
actgaaccactatttcttcagtggctgtgcctatgtcttgggaaactatgggaagatttt
gcagaggcacaaaccatgggtgtgctggcagatgcctctgctgtattagcacctctactt
tctgagccccaacctgaggttcgagctgcagctgtttttgctctgggcactgtcctcgat
gttgggtttgacacatcaagagatggtgctgggggtgaggaagattgtgatgatgatgaa
aaagttaggtttgaggccagtattgtcaaaaaccttctgaatgttgtttctgatggaagt
cctttggttcgtgctgaggtggctgttgctctagctcgttttgcctttggccacaacaag
cacctgaaatctgttgctgctgcatactggaagcctcagcctaactctgtgcttgctgcc
ttgcctgcgtttgcagtcaagggttcaggtagtggctatacgactccaacacaatacatg
cctcatggaagtattgttccatctgcagtttctcctttgctcagagttggggaaaacagc
cagcctgtagttcgtgatgcaagagtgtttaccagtagcccccttgcaacatctggaatc
ttgcatggctctcctctctctgatgattcatctcagcattctgattctggcatagtggct
gactccattaccaatggggtagttaaccatgcaagggctagaccacttgacaatgcactc
tattcacaatgtgtgttggctatgtgcactctggccaaagatccatcgccacgaatcgcc
agtcttggtcgtcgagtattatctattattggcattgaatcagtggttgcaaaaccagtg
aggtctactccaggtaatgcccagcctagtgaatccatggctaatgccagcactagtctc
actggactagctcggtcatcatcatggtttgatatgaatggagggcatttgcctctcacg
tttagaacacctccagttagccctcctcggcctagttacttgacaggaatgcggagagtg
tattccttggagtttagaccacatctaatgaattctccagattctggattagctgatcca
cttttggcaacagctggacctgctggagcttcagaacgcagttttcttccacagtctacg
atctacaattggagttgtggtcacttctcaaagcctcttctcacagctactgatgatagt
gaagagattattgccagaagagaagagagagaaaagctggctttggaccgtattgcaaaa
tgccaacattctgggggaggattaacagcatccttgccctttcttttgacagctgtgaac
agactgcgtgatcaaattgccagttgggatgcaaaatttgagacaggcaccaaaactgct
ttgctgcagcccttttctccagtcgtggttgcttcagatgagagcgagacaatcagaatc
tggaattacgaggaatctacactactgaacagttttgagaatcatgattaccctgacaaa
ggaatttcaaagctgtgtcttgtgaatgaacttgatgagagcttgctgcttgttgcttca
agtgatggaaatgtccggatttggaaggattatacttcaaaaggtcaacaaaaactggtt
actgcactctcttcgattcaaggtcacaggccaggcgtgcggagtgtgaatgcagtagtc
gattggcaacagcagtctggatgtctgtttgcttcgggtgaagtgtcatctatcatggca
tgggatctggataaggagcagcttgtaaatactataccattatcctcagattgcagcatt
tcagcactgtctgcttctcacattcatgggggccagttcgtggctggtttttcggatgga
tttgtgagattatatgacactcggacacctgaaatgcttgtttctgcaacacaaccgcat
acacagagattagaaaaaattgtaggaattgcctttcaacctggacttgagccaggaaag
attgtgagtgcctcgcaagctggctatattcagttccttgatttgagacatctcagggat
acgtatctcacaattgatgctcaccggggttcacttactgctttagctgtccatcgacat
gctccccttattgctagcggctccgcaaagcagcttatcaaaatcttcaacttggaagga
gagcaattaggcagcattcgatattacccaagtttcatggcccataagattgggtctgtt
agcagccttaccttccatccttatgaagtgttgcttgctgctggcactgcagatgcttgc
gtttctatttatgctgatgcgacatctactgcaagatga
DBGET
integrated database retrieval system
