Coffea arabica (coffee): 113692982
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Entry
113692982 CDS
T11342
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113692982
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113692982
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113692982
Peptidases and inhibitors [BR:
carb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113692982
Ubiquitin system [BR:
carb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113692982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113692982
NCBI-ProteinID:
XP_071909133
UniProt:
A0ABM4UPC9
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Position
6c:complement(14198696..14207218)
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AA seq
937 aa
AA seq
DB search
MMAAETMINSLSVRSVEDPEKESVTTSDASNSNAALFHRRIEFHLARKSFNGFSDGGNSG
NGFKLVTLNPRNSNASLKSESHKTWSGYGKAPSESSLENHSGLDPELSFTITFRRIGAGL
QNLGNTCFLNSVLQCLTYTEPLAAYLQSGRHKISCHIAGFCALCAIQKHVSRALESTGTV
LAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYEKSLVHK
IFGGRLCSQVKCMQCSFCSNKFDPFLDLSLEIMKADSLYKALAYFTAKEQLDGGERQYQC
QQCKQKVKALKQLTVYKAPNVLAIHLKRFGSHMPGQKIDRKVEFGPSLDLKPFVTGPYDG
ELKYTLYGVLVHAGWSTHCGHYYCFVRTSSGTWYSLDDNQVVQVSERRVLEQKAYMLFYV
RDGMYSTPKKVVDAVHKESMVINTFGRKTYPNFHQGSEENVPNGAVGGKLNDSFSAIAAQ
KDVVNPNIISQNQMKKDPAQKINGPTAPEESCLKKDRPAANLLKVPPVDGLSRSNINGGD
CLVQSLPSSKGSDGFVNLGNSSNSGSSSGIELTTAIVKQEDINGSQSSAGKNETDSAVIP
TNGNIKVSAGKDPSNAVDRPPNGNVLHRPPQDTCVSLETNAGKVGCFPDNTGVAEVGVRK
ARDSKDLARRKPAPKHLLCEKSLNDRLHLVKRKPLKLVVTTKHLSRNIILGAALGRRKKK
NRAKHCCPKKLDGSRILSDLGPSTSEDCKTISCSAYPPRRLRSSADEKDKVLGLKSPSNN
GELLRVVKVVPRRDEVGQHEKVPLTDAQPSKSYYSTSGGELSDNGKSCGSAHKKIEKVEN
GLIRIPARGLEETTVARWDGVESSDDILESRGAENLRIGYIGDDWDEEYDKGKRKKVRSS
KLTFDGINPFQEIATHKAKSKKAKLDRCSSANQPFRI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggagacgatgataaattctttgtcggtcaggtcagttgaggatccggaa
aaggagtcggttacaacgtcagatgcttcgaattcgaatgcggcgttgtttcatcggaga
attgaatttcatttggcgagaaagtcgttcaatgggttcagtgatggaggaaacagtgga
aatgggtttaagctggtgaccttaaacccgcgtaattcgaatgccagtttaaaatcggag
tcccacaaaacttggtccgggtacgggaaggccccctccgagtcttccttggagaatcat
agtgggttggatccggagcttagctttacaatcactttcaggagaattggtgctggcttg
caaaatcttggaaatacttgttttctcaattctgtattacagtgtctgacatacactgag
cccttggcagcttatttacaaagtggtcggcataaaatatcctgtcatattgctgggttt
tgtgctttatgtgccattcagaaacatgtgagccgagctctggaatcgacaggaacggta
ttggctccgaaagatcttgtatcaaacttgcggtgcatatctcggaactttagaaatgct
agacaagaggatgctcatgagtacatggtcaatttattagaatcgatgcacaaatgctgc
ttgccttctggagtgcccagcgaatcacccagtgcttacgagaaaagtttggtccataag
atatttggtggtcgcctttgtagtcaggtgaaatgcatgcagtgttcgttttgctcaaac
aagtttgatccattcttggatttaagtcttgagataatgaaggcagactcattatacaag
gcactagcttattttactgccaaagagcagttagatggaggggagaggcaatatcagtgc
caacaatgcaagcaaaaagtcaaggctcttaagcagctgactgtttacaaggcacccaat
gtccttgcaatccacttgaagcgttttggttctcatatgcctggccagaagattgacaga
aaagttgagtttggcccttcattggacttaaaacctttcgtgactggtccatatgatggg
gaattgaaatatactctctatggtgttctggttcatgctggttggagcactcattgtggt
cattactactgctttgttcggacatcaagtggcacgtggtactctcttgatgacaaccag
gttgttcaagttagtgagaggagggttttggagcagaaggcttatatgttgttttatgtt
cgagatggaatgtattccacacctaagaaagttgtcgatgcagtacataaagaaagtatg
gttataaatacatttggaaggaaaacgtatcctaattttcatcaaggatcggaggaaaat
gtcccgaacggagcagttgggggaaagttgaatgattccttttctgctattgctgctcag
aaagatgtagtgaatcctaacatcataagccaaaatcaaatgaaaaaggatcctgctcag
aaaattaatggcccaacagctcctgaagaatcatgcttaaagaaagaccgtcctgccgca
aatttactgaaggtgccacctgtggatggcctttccagatcaaatataaatggtggagat
tgcttggtgcaatcacttccatcttctaagggatctgatggctttgttaatcttgggaat
tctagtaactcgggcagtagcagtggcatagaactgactactgctattgttaagcaagaa
gacatcaatggctcccaaagttctgctggaaagaacgagactgattctgcggtcatacca
actaatggaaatattaaagtgagtgctggtaaagatcccagtaatgcggttgacagacca
cctaatggcaatgtcctccatagacctcctcaagatacatgtgtttctttggagactaat
gctggaaaggttggatgtttccctgacaatactggtgtagctgaggtaggtgttcgaaag
gctcgtgatagcaaagatctagcacgcagaaaaccagcaccaaaacacttgctttgcgaa
aagtcccttaatgacaggctgcatttagtaaagaggaagcctttgaagcttgttgttaca
accaagcatcttagcagaaacatcattttaggagcagccttgggacggagaaagaagaaa
aacagggccaaacattgttgcccaaaaaaactggatgggagtcgtatcctgtcagatctc
gggccatctacttctgaggactgcaaaactataagctgttcagcttaccctcctaggagg
ctcagatctagtgcagatgagaaagataaggttctaggtttgaagagtccttcaaacaat
ggtgaacttctaagggttgtgaaggtcgtcccacgtagggatgaagttggtcaacatgag
aaagttcccttgacagatgcacaaccaagcaagagttattattccacatcgggcggagag
ttatcagataatggaaaatcatgtggctccgcacacaagaaaattgaaaaggtggagaat
ggtttgatacggattcctgctagaggtttggaagagacaactgttgcacgttgggatggt
gttgaaagttctgatgatattctagaatccagaggcgcagaaaatcttagaattggttat
attggggatgactgggatgaggaatacgacaagggaaaaaggaagaaggttagaagctcc
aagctcacatttgatggaatcaatcctttccaagaaattgcgacgcacaaggcaaaatca
aagaaagcaaagttggaccgatgcagctctgcaaaccaaccattcaggatatga
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integrated database retrieval system
