Coffea arabica (coffee): 113693032
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Entry
113693032 CDS
T11342
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113693032
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113693032
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
113693032
NCBI-ProteinID:
XP_027067420
UniProt:
A0A6P6SNF3
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Position
6c:16471317..16475102
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AA seq
452 aa
AA seq
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MTLHTKFFAHLIVTFLFLVSCPSAFHGDLHDHSDIQQTGYDSEAYPSFLSTVDGSQFDNS
MMFEAGASDGLTKLSRLESSGRIINVDRFGAKGNGAEDDSNAFQSAWREACLSTVAVTLV
VSQGKDYLLKPVKFSGPCKSEITVQINGVLLASDDRSDYGRDGRQWIRFDSVQGLIVEGR
GVINGRGNIWWQNSCKINKALPCKDAPTAVIFYNCKNLVVQNLRFQDAQQIHMAFEKCIN
VQASNLIVTAPEESPNTDGIHVTNTQNIQISGCTIGTGDDCISIVSGSQNVQATDITCGP
GHGISIGSLGSENSEAHVSDVTVHGARLSGTTNGVRIKTWQGAAGSVSNIKFQNIQVHDV
QNPIIIDQNYCDQATPCTQQHTAIQISNVLYQNIYGTSASAAAINLNCSKSFPCRGIVLQ
NVNLVREGGGAAKASCNNVNLSNVGLVSPRCA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgactctacatacaaaattctttgcacatttgattgttacattcctatttttagtttca
tgtccctcagcctttcatggggacctacatgatcatagcgatatccaacaaactggatat
gactctgaagcatacccttcatttcttagtactgttgatggcagccaatttgataactcc
atgatgtttgaagccggggcttctgatggcttgaccaaactttccagactcgaaagctcg
ggtagaatcattaatgtggataggtttggagctaagggtaatggagctgaggacgattca
aatgcatttcagtctgcttggagagaagcttgtttgtctacagtagctgttactcttgtg
gtatcccaaggaaaagattatcttcttaaacctgttaaattttcaggtccctgcaagtct
gaaattacagtgcagattaatggtgtccttctagcttctgatgatagatcagactatggt
agagatgggaggcagtggattcgttttgacagcgtccaaggcttgattgttgaagggcgt
ggagttatcaatggaagaggaaatatatggtggcaaaattcatgcaaaatcaacaaagct
ctgccatgcaaggacgcaccaacggctgtgatattttacaactgcaagaacttggtagtc
cagaatcttagattccaagacgcacaacaaattcatatggcttttgagaaatgcataaat
gtccaagcttccaatttaattgtgactgcaccagaggaaagccccaatactgatggaatt
catgtaacaaacactcaaaatatccaaatctctggctgcacaataggaacaggtgatgat
tgcatttcgattgtaagtggatcccaaaacgtgcaagctacagacataacatgtggacca
ggacatggaattagtattggaagcttgggatcagaaaattctgaagctcatgtctctgat
gtgactgtacatggagcaaggctttccggcaccactaacggagttaggatcaagacatgg
cagggggcagctgggagtgtaagcaacatcaagttccaaaatatccaagtgcatgatgtt
cagaacccgataatcatagaccaaaactattgtgaccaagccacgccttgtacacaacag
catacagccatccaaattagcaacgtactctatcagaacatctatggaacaagtgcttca
gccgcagccataaacttgaattgcagcaaaagcttcccatgtcgagggattgtgctacaa
aatgttaatttagtacgtgaaggaggtggagcagcaaaagcttcatgcaacaatgtcaat
ttgagcaacgttgggctcgtttctccacgatgtgcataa
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