Coffea arabica (coffee): 113693814
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Entry
113693814 CDS
T11342
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113693814
03029 Mitochondrial biogenesis [BR:
carb03029
]
113693814
Membrane trafficking [BR:
carb04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113693814
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113693814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
113693814
NCBI-ProteinID:
XP_027068322
UniProt:
A0A6P6SQZ4
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Position
6c:6120492..6129929
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AA seq
827 aa
AA seq
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MWRSLWPTIDRFSLHHFRYIVNQLREIRVVDKRNREVVLDLLQSIVEIVTYGDRHDPAIF
ECFMEFQVLAEFVRILKIGGNSGIEAPLLQYLSIMIQNVENEHAIYYCFSNGYINSVISH
HYEFDGGDLIPYYVSFLRTVSGKIGRDTICLLVKVHQDTAISLPLYDEALKFANHGEKMI
QIAVRALTLNIYNVADEMVYQFLTTPTASAYFSSLILNLKNKCLHVDAIINGVKESFHEK
KRDLLSETDRILDDFYYLKDILCIPEQRLNKLVTENIVNMLILPMLLTLLNNRLSNDTGL
SAITCLYVLCRLLQVFDGTNLVNVIGSAVLFSFMPPNVTDAAESVVSARLEQVNGLAVCY
QEGEEMVDLQHEGAENFMMNYVLKHSLEFTELSSCFDSSPLENSENEWGGIFSCIFSRNH
SLMLGSLMLLFTVADSKDLHYQLAAKIGFSQVKTASEMIGSTVAGHIQKIVNQLLKVLAS
EPPLSVPILLHAAWFLRKLLVFLDQKLEDNDCHLFKTSYEVSCGHLYEEFDRCWFDHIPD
VLKSEWANCKTALEESSQSKDPFFLLELASIQNPPSGSMAFLLLSSFLLLFIFLLFYLCC
LLLKSIVLPPASFLFNISGNTGPAFDWQRMVDCVKVFVLHLQLKPFIFGGDPFDNPLANL
KNSYLAQSGKRYPSDLSLASFGSEVALGSGIPCKIAFSGAGTRDIYVIPIAREISGKLLL
VERHPLHSRKGVVIAIAPLAGLDPKIDEEHPTWLLVHLRDFEPRLRSDETKTLDSHTSLP
EQGRWILGFLSAKDCKAAFSVILEETRKQRSFVENLVAPVLEEKLFK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtcactttggcctacaatcgaccgcttctctcttcaccacttcagatatatt
gtaaaccaactgcgggaaatcagagtcgttgacaagcgcaaccgggaagtagttttggat
ttgcttcaatcaattgtggaaatagttacctatggcgatcggcatgatccagcgattttc
gaatgtttcatggaatttcaagttttagcagagtttgttcgtatactaaagattggtggg
aattcaggaattgaggcaccactcttgcagtatttgagcataatgatccagaacgtggaa
aatgaacatgccatctactattgtttcagcaatggctatatcaacagcgtaatatcacat
cattatgagttcgatgggggagatctaattccttattatgtatcctttctgagaacagtt
agtgggaaaataggtagagacacaatctgtcttcttgtaaaggttcaccaggacactgca
atctcattgccgttgtatgatgaggctcttaaatttgctaaccatggggaaaagatgata
cagatagcagttcgtgcactgacccttaacatttataatgttgctgatgagatggtctat
caatttctaacaactcctactgcttctgcatacttttctagcttgattctgaatttaaaa
aataagtgcttgcatgttgatgctatcatcaatggggtaaaggagagtttccatgaaaag
aaaagagaccttctttcagaaactgatagaattttggatgacttctattacctgaaggac
atactgtgcattcctgagcagcgcttgaacaaacttgttacagagaacattgttaacatg
cttattttgccgatgttgcttactctactaaacaataggctaagcaatgacactggtcta
tctgcaatcacttgtctctatgttctttgtcgtcttcttcaagtttttgatggaacgaat
ttggttaatgttatcggcagtgctgttctattttcttttatgcctccgaatgtgacagat
gctgctgagtctgttgtatctgctagacttgagcaggtgaatggtcttgcagtctgttat
caggaaggggaagaaatggtagatcttcagcatgagggggcagaaaacttcatgatgaac
tatgttcttaagcattcattggagttcacagaactgagctcttgttttgacagttcaccg
ctggagaattcggaaaatgaatggggtggaatatttagttgtattttctcccgtaatcac
agtctaatgctaggttctttgatgttattgtttacagtggctgacagtaaagatcttcat
taccagttggctgcaaagataggattttctcaagtaaagactgcttcagagatgattgga
agcactgttgcaggacacatacagaagattgtgaatcaattattgaaggttttggcgagt
gaaccaccattgtcagtaccaatattgttgcatgcagcttggtttttgcgaaagttgttg
gtttttctggaccagaagttagaggacaatgattgtcacctcttcaagacctcatatgag
gtctcttgtggacatctttatgaagaatttgatcgatgctggtttgaccatattccagat
gtgttaaaaagcgaatgggccaactgtaaaacagcacttgaagaatcatcacagtccaag
gatcctttctttcttctagaacttgcatctattcaaaatcctccaagtggtagtatggcg
tttcttctactctcttccttccttcttttattcatatttcttttgttttatctctgctgt
ctgcttttaaaaagtatagtcttaccacctgctagttttctatttaacatctcaggcaat
accggtcctgcttttgattggcaacggatggttgattgtgtcaaggtttttgttctccat
cttcaactgaagccatttatttttgggggtgatccttttgataatcctttagcaaatttg
aaaaacagctacttggctcaatcggggaaaagatatccttcggatctttcattggcaagc
ttcggttcagaggtagctttaggttctggaatcccctgtaaaattgcattttctggagct
gggacaagagatatttatgtgataccaattgcaagggaaatatctggtaaattgctactt
gtggaacggcatccgttacactctagaaaaggagttgtaattgccattgctccattggct
ggattggatcccaagatagacgaggagcatcctacatggttgctagtgcatcttagagac
tttgagccaagactccgatcagatgagacgaaaacactcgactcccatacatcactccct
gaacaaggaagatggatacttggatttttgagcgccaaagattgcaaggctgctttctcg
gtgatactcgaggaaaccagaaaacagaggtcctttgtggagaacttggttgctccggta
ctggaagagaaattgttcaaatag
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