Coffea arabica (coffee): 113693822
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Entry
113693822 CDS
T11342
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1 isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113693822
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113693822
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113693822
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
113693822
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
113693822
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113693822
Prokaryotic type
113693822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Desulfoferrodox
YhfZ_C
Motif
Other DBs
NCBI-GeneID:
113693822
NCBI-ProteinID:
XP_027068350
UniProt:
A0A6P6SRD7
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Position
6c:9979354..9982620
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AA seq
569 aa
AA seq
DB search
MSIDSTPPLEQLSLSGTVEEAQFSRRVLIHSILSRPDGGAGLAGQVVKIGGWVKTGREQG
KGAFAFLELNDGSCPANLQVIVESGVHKLGDLVPTGTSVYVEGELKKPPEGTKQKIELKV
LKVLDVGTVDAAKYPLPKTRLTLEFLRDFVHLRPRTNTISAVARIRNELAYATHTFFHKH
GFLYVHTPIITTSDCEGAGEMFQVTTLINEAEKLEKELKENPAPSEADIVAAELLVKEKG
EAVAQLKSAKASKEEISAAVAVLTKAKENLVKLQERFRLGNRCKLSAGIPKKDGKIDYSE
DFFARQAFLTVSGQLQVETFACALSSVYTFGPTFRAEQSHTSRHLAEFWMVEPEIAFADL
QDDMNCAEAYVKFLCQWLLDYSLADMEFMAAHIDKTCIDRLKMVASSNFYRITYTEAIAI
LEEVSKARKFENKVEWGIDLASEHERYLTEEKFKAPVIVYNYPKGIKAFYMKLNEDKKTV
AAMDVLVPKVGELVGGSQREENYEVLRARILEMNLPLEPYEWYLDLRRYGTVKHSGFGLG
FERMILFATGIENIRDVIPFPRYPGRADL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgattcgacgccgccattagaacagctctccctaagcggcaccgtcgaggag
gcccagttttcccgccgggtcctgatccactctattctaagccggcccgatggcggggcg
ggactagcaggtcaagttgtgaaaatcggaggatgggtgaaaactggccgagaacagggg
aaaggtgccttcgcgtttctggaactcaacgacggctcttgtccggcgaatctgcaggtc
atagtggagtccggcgtgcacaagcttggcgatttggtgcccaccggcacgtccgtgtac
gtggaaggcgagcttaagaagcctcccgaggggactaagcagaaaattgagctcaaggtt
ctgaaggttctggatgtggggactgttgatgcggccaagtatcctttgccgaagaccagg
cttacgctggaattcctaagggattttgtgcatcttcgcccccgaaccaacactatttct
gcagttgctcgaatccgtaatgaactggcttatgccacccatacatttttccacaagcat
ggatttctttatgtccacactcctatcataaccactagtgactgtgagggtgctggtgag
atgtttcaggtcacaactttaattaatgaggctgaaaaattggaaaaggagcttaaagag
aaccctgctccttcagaagctgacatagtagctgctgagctcctcgttaaggagaaggga
gaagccgttgctcaactcaaatctgctaaagctagcaaggaagaaattagtgctgctgtt
gcggtgcttactaaggctaaagagaatcttgtgaagctgcaagagaggtttaggttgggg
aacagatgtaagcttagtgctggcataccaaaaaaggatggaaaaatagattattctgaa
gatttctttgctcgtcaagcatttctgactgtttctgggcaacttcaggttgagacattt
gcttgtgcgctcagtagtgtttatacatttggaccaacttttcgagctgaacagtcacat
acatcaaggcatttggcggagttttggatggtggagcctgaaattgcgtttgctgatctc
caggatgatatgaactgtgcagaagcatatgtgaaattcttgtgccagtggttacttgat
tattccctcgctgacatggagtttatggccgcccatattgacaaaacttgcatcgataga
cttaaaatggttgcctcaagcaacttctaccggataacttatacagaagccatagcaatt
cttgaggaggtgtcaaaagcaaggaaatttgagaataaagtagaatggggaatagatttg
gcatctgaacatgagagatacttgactgaagagaaatttaaagcgcctgtcattgtttac
aactatcccaaaggaattaaagcattctatatgaagctcaatgaagacaagaagactgtt
gcagcaatggatgtccttgtaccgaaggtgggtgaattggtgggaggaagccaaagagaa
gagaattatgaggttctcagagcaagaatattggagatgaatctaccactcgagccatac
gagtggtaccttgatctccgacgctatggaactgtcaagcacagtgggtttggtctaggc
tttgagaggatgattctttttgctacagggatcgagaacattagagatgtcatcccgttc
cccagatatcctggaagggcagatctttaa
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