Coffea arabica (coffee): 113694032
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Entry
113694032 CDS
T11342
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113694032
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113694032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113694032
NCBI-ProteinID:
XP_027068683
UniProt:
A0A6P6SRZ2
LinkDB
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Position
11e
Genome browser
AA seq
766 aa
AA seq
DB search
MTRRSIDDLELSSDEEVWSKHSFKFSRVINSDDATSSKPRPRAAPPPIESFAYSNNSGNN
LSSCDLIEIVESSSEENGCENLEDDDVDLEVSNRSRKSVKTSTSSRGRRFVIDDDEEEEE
EEKIVSNSKENDELSDSFEEEEEEENDVIKKALQKCGKISAELRRELYGTTAAACDTFSE
IEENSSLRIVTQDDVEEACGGADSEFQPVLKPYQLVGVNFLLLLYRKKIGGAILADEMGL
GKTIQVLLVLLAITYLTLLKHLEGDSGPHLIVCPASVLENWERELKKWCPSFNVLQYHGA
ARSAYSKELSYVSKAGLPPPFNVILVCYSIFERHSAQQKDDRKILKHWCWSCVLMDEAHA
LKDKNSFRWKNLMSVARKAKQRLMLTGTPLQNDLHELWSMLEFMMPDLFATGDVDLRKLL
NAEDRDLIAQIKSILGPFILRRLKSDVMQQLVPKTQKVEYVKMENLQADAYREAIDNYRA
ISQARISKLAKIDLNSVARILPRRQISNYFLEFRKIANHPLLVRRIYTDDDVVRFAKALH
PKGVFGFECTLDRVIEELKNYSDFSIHQLLLYHGDADGKGVLSDEHVMASAKCQALAELL
PILQHEGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQTIVDTFNKDSSIF
VCLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTVYRLVTKDTV
DENVFEIANRKLTLDAAVLQSGVEVEDEGMVPDKTMGEILSSLLLG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacggagcatcgatgatttggaactgagctccgacgaggaggtatggtccaaa
cactcgttcaaattctcgcgagtcatcaattcagatgatgcgacgtcgtcgaagccacgg
ccaagggcggcgcctcctccgattgaatcgttcgcctattctaataattcgggaaataat
ttgagtagctgtgatttgattgagatagtggagtcttcttctgaagaaaatggttgtgag
aatttggaggatgatgacgtggaccttgaggtgagtaacagaagtaggaaaagtgtgaaa
acttcaaccagcagtcgcggccgtcgatttgtgatcgatgatgatgaagaagaagaagag
gaggaaaaaattgttagtaatagtaaggaaaatgatgaattgagtgattcttttgaggag
gaggaggaggaggaaaatgacgtcatcaagaaagcgttgcagaagtgtgggaagatttca
gctgagctgagaagagagttgtacggtacaaccgctgctgcctgtgatactttctctgaa
attgaggagaattcttcacttagaatcgtcactcaggatgacgtggaggaggcgtgtggt
ggcgcagactccgaatttcagccagtgctaaaaccttaccaattggttggggtcaatttt
cttcttcttttgtatagaaagaaaattgggggagctattttggcagatgagatgggtctt
ggtaagaccattcaggtacttctggttctgttggctattacatatttaacattgctgaag
cacctggaaggtgattctggtcctcacctgattgtttgtcctgcttcggttcttgagaac
tgggaaagagagcttaaaaaatggtgtccatcctttaatgtgctccagtatcatggtgca
gctcggtcagcttattcaaaggaattgagctatgtttcaaaggcgggattgcctcctcct
tttaatgttattcttgtgtgttactccatttttgaacgacacagtgcacagcagaaagat
gatcgcaaaattttgaaacattggtgctggagttgtgtgctaatggatgaagctcatgca
ctgaaggacaaaaatagctttagatggaaaaatttgatgtctgttgcacggaaagcaaag
cagcgtttgatgcttactgggacaccactacaaaatgacctgcatgagttatggtcaatg
ttggagttcatgatgcctgatctctttgctactggagatgttgatctgaggaagcttctg
aatgcagaagatagagacttgattgctcaaataaagtctatcttgggtccatttatattg
agaagattaaaatctgatgtaatgcagcagctagtcccaaagacccaaaaggttgagtat
gtgaagatggaaaatctacaagcagacgcttacagagaagcaattgacaattatcgggca
atttctcaagctcgtatttcaaagttagcaaaaatcgatttaaatagtgttgctagaatt
ttgcctcgaagacaaatttcaaactattttcttgaatttcgtaagattgcaaatcatcca
ctattggtgaggcgcatttacacagatgatgatgttgttcggtttgctaaagctttgcat
ccaaaaggtgtatttggctttgaatgtaccttggaccgagtgattgaggagcttaagaat
tacagtgacttctcaattcatcagcttttgctctatcatggagatgcagatggcaaggga
gttctctcagatgagcatgtaatggcctctgcaaagtgtcaggcattagccgaactcctc
cccattctacagcatgaagggcatcgtgttcttatttttagccaatggacgtcgatgctt
gatattttggagtggaccttggatgttattggggtcacgtacaggcgtcttgatggaagc
actcaggtgacagaaaggcaaacaatagttgataccttcaataaggactcttctatattt
gtgtgcttgctttcaacacgagcaggcggacagggtttaaacttgactggagctgacact
gtcataatacatgacatggattttaatccacagatagatcgacaagctgaagatcgttgt
catcgcattggacaaacaaaaccggttacagtatataggttagtgacaaaggatactgtt
gatgaaaatgtgtttgagattgcaaatcggaagttaacgctagatgctgccgtattacag
tctggggtagaagttgaggatgaaggtatggtgcccgataagacaatgggagagatttta
tcatccctgttgcttggctaa
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