Coffea arabica (coffee): 113694728
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Entry
113694728 CDS
T11342
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113694728
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113694728
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
90S particles
Helicases
113694728
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
Cas3-like_C_2
SLAM
P-loop_SecA
SNRNP27
T4SS-DNA_transf
AAA_19
Motif
Other DBs
NCBI-GeneID:
113694728
NCBI-ProteinID:
XP_027069383
UniProt:
A0A6P6STW5
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Position
6e:complement(2687945..2692727)
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AA seq
536 aa
AA seq
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MAERDTSFLFSGTSFNRKKFAAVFTRFKEKKGNDVSPRAEPKLVEDATPALQEEEGVKTH
YADKKRKRKAVDSDPVEGFSVFKSSKSQKANEDDQQAENAIMLEKKEYYRQLEGDAIFRK
KHNIHVSGSNVPSPLRSFAELKSRFSSKSYILRNLAELGFEEPTPIQRQAIPVLLSGREC
FACAPTGSGKTFAFVCPILMKLKRASKDGVRAVILCPTRELAAQTARECKKLAKGRKFYI
KLMTKQLVKGADFSKLCCDILISTPFRVQFAIRKKKLDLSKVEFLILDESDKLFELGLVK
QVDSVVKACSNPSILRSLFSATLPDTVEELARTIMHDAIRVIIGRKNSASESIKQKLVFV
GSEEGKLLALHQSFAESLNPPVLVFVQNKERAKELYNEVKFDDIRAGVIHADLSQVQRED
AVNNFRAGKTWVLIATDVIARGMDFKGVNCVVNYDFPDSAAAYIHRIGRSGRAGRSGEAV
TLYTEADVPYLRNIANVMAASGCEVPPWIMSLPKLKWKRHRPQREAISTKPVGEDE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagagatacctctttcctcttctccggcacctctttcaatcgcaagaaattt
gccgctgttttcaccagattcaaggagaaaaaggggaatgatgtgtcaccaagagcagag
ccaaaattggttgaagatgcgactcctgcactccaggaggaggaaggtgtgaaaacgcat
tacgctgacaagaagaggaagaggaaagcagttgattctgatcctgttgaaggattcagt
gttttcaagagctcgaaatcccaaaaggccaatgaagatgatcagcaggctgaaaatgca
attatgctagaaaagaaggaatactatcgtcagttggagggagatgcaattttccgcaag
aagcacaatattcatgtttctgggagtaatgttccttcaccacttcggagttttgccgag
ttaaaatcaaggtttagttctaaatcatatatattgcggaacttagcagaacttggattt
gaagagccaacaccaatccaaaggcaggctattcctgttctcctatctgggcgggaatgc
tttgcatgtgctcccactggttctggtaaaacatttgcctttgtctgtccaatactgatg
aaactcaagcgtgcttccaaagatggcgttcgagcagtaattctttgcccaacaagagaa
ttggccgctcagacggccagagaatgcaagaagttggctaaagggagaaagttctatatc
aagctaatgactaaacagcttgttaaaggtgctgacttttcaaaactatgttgtgacata
ctcatatcaacaccatttcgcgtgcagtttgccattcgtaaaaagaagcttgatctgagc
aaggttgaatttctcatccttgacgaatctgataaactatttgagctgggcttggtgaag
caggttgactcagtggttaaagcatgctctaatccttctatattacgatccctgttcagt
gctactttgcctgatacagtggaagagcttgctcgcacaataatgcatgatgccatccga
gttattattggtcggaaaaattctgcttctgaatcaataaagcaaaagctggtttttgta
ggaagtgaagaagggaagcttcttgctcttcatcaaagctttgcagagagtttaaatcca
ccggtactggtatttgtccagaataaagagcgggccaaagagctttataatgaagtgaaa
tttgatgatattagagctggtgtgatacatgctgatttatcacaagtacagagagaggat
gctgttaataacttccgagctgggaaaacatgggtgttgattgccacggatgttattgct
cgtggtatggattttaaaggtgtcaattgtgttgttaattatgatttccctgattcggca
gcagcatatattcacaggataggtcgttctggtagagctggtaggagtggggaagcggtt
accctgtacaccgaagctgatgttccatacttgcggaacatagctaacgtgatggcagca
tcaggctgtgaagttccaccctggatcatgtctttaccaaagctcaagtggaagaggcac
aggccacaaagagaggctatttcaactaaaccagtaggtgaggatgaatag
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