Coffea arabica (coffee): 113695023
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Entry
113695023 CDS
T11342
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113695023
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113695023
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113695023
NCBI-ProteinID:
XP_027069773
UniProt:
A0A6P6SV13
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Position
6e:complement(2370696..2374226)
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AA seq
400 aa
AA seq
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MGNQQVRYCFGRHKKKHQPNTNTATNNPPIPQTETQTPPPPYKYPYQQPSVPTSTTSTAT
NNLAMGLCLPYTHVDSALRALAAQAEGFGRLAIGGLRGPLYHVTTLADDGPGSLRDGCRR
KEALWIVFEVSGIIELKSYLNVSSYKTIDGRGQRIKLVGKGLRLKECEHVIICNLEFEGG
RGPDVDAIQIKPNSKHIWIDRCSLSDFDDGLIDITRESTDITISRCHFSKHNKTILIGGD
PSHTGDRCMRATIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAICASVESEIYSQC
NIYEAGEKKVAFKYLSEKAADRAEANTGCIKSEGDLFVCGTQAGLLTQSHESNTFHPSEY
YPSWTVEPPSDALKHYIQHCTGWQHIHRPPDQSAVAQPCS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccagcaggtgcgttactgcttcggacggcacaagaagaagcaccaacccaat
acaaatactgctacaaataacccgccaattccacaaacagaaacccaaacacctcctcct
ccttacaaatatccctatcaacagccctcagttcccacgtcaaccacttccactgccacc
aacaacttggctatgggattgtgtttgccgtacacccacgtggactccgccttgcgagct
ctcgctgcccaagccgaaggttttggccgcttagccattggcggccttcgcggccctctc
taccacgtcaccactcttgccgatgatgggccaggatcacttcgtgatggatgtcgtaga
aaagaagctctctggatcgtctttgaggtttcaggcataattgagctcaaatcctacttg
aacgtctcatcttataaaaccattgatggtcgtggccaaaggataaagctcgtgggaaag
ggtttgaggttgaaggaatgtgaacatgtcattatctgcaatctggagtttgaagggggc
agaggacctgatgtggatgcaattcaaattaaaccaaattcaaagcacatttggattgat
cgatgcagcctttccgactttgatgatggtttaatagatataaccagggagagcactgat
attactatttctcggtgccacttctcaaagcataacaaaactattcttattgggggagac
ccttctcacactggtgacagatgtatgcgcgctaccattcaccattgtttttttgatggg
acgcgacagcggcatcctcgcgttaggtttgcgaaagtacatctatacaataattacacc
agaaactggggaatctatgctatttgtgcgagtgtagaatctgagatatattcgcagtgc
aatatatacgaagcaggagagaaaaaggtggcttttaagtacctctccgaaaaggcagct
gacagagcagaggcaaatactggctgtatcaaatcagaaggagacttgttcgtctgtgga
actcaggcaggcttattgacgcaatcccatgaaagtaacacatttcatcctagtgaatac
tatcctagttggacggttgaacctccaagtgatgcacttaaacattatatccagcactgc
accggatggcagcacatacacagacctcctgaccagtcagctgttgctcagccatgctca
taa
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