Coffea arabica (coffee): 113695255
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Entry
113695255 CDS
T11342
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113695255
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113695255
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113695255
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRORP
PPR_long
PPR_2
TPR_24
PPR
PPR_3
RNase_Zc3h12a
PPR_1
Motif
Other DBs
NCBI-GeneID:
113695255
NCBI-ProteinID:
XP_027070081
UniProt:
A0A6P6SWJ8
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Position
6c
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AA seq
849 aa
AA seq
DB search
MASFTCPRLQQSRLQLLSFAHCNYSSALITFLNVSTTKHAFDRRFSPFLQVNAHVAPLEA
RLPKNTHHNVSRNNHKAIGQNGSGVSADSLRDRRIGESFQKSSHFDAAVADNVEKRVILK
DRHAKTRLNPKSRTVTSPQFSSTRSKDGNTGKYVKKAQGNGQGTSKKERKPENEDQVNQL
EVERVGKGSKKSKADTPGTVLRAGLDMCSKRGDVIGAIRLYDLARKEGMNLGQYHYAVLL
YLCSSAATGVVQPAKSGSGNRSLNPLGLSKEINSENKEGLDFNGFPAKVNNPVSFSNDSK
LPYPQSLDEMVQFMKSDTEHANKDVMGEEGSGIQVTLDVKRYALKRGFEIYNNMLFDKVP
MNEATFTSVARIAMSLGDGDLAFDVVKQMKELGINPRLRSYGPALSVFCNNGDVEKAFMV
EEHMLQNGVCPEEPELQALLRVSVETGKSERVYYLLHKLRTSVRQVSSSTADLIEKWFRS
KVASRVGKRKLGQRLIKKAMENGGGGWHGLGWLGKGRWTVSRTSVGSDGLCRCCGEKLVT
IDLDPAETEHFARSVTSLAIQRDKNSNFEKFQKWLDYYGPFEAVVDGANIGLYTQRKFKP
SKVNAVVNGLRQMLPSKKWPLIVLHNRRLTGDKMNEPANRALIEKWKNADALYATPTGSN
DDWYWLYAAIKFKCLIVTNDEMRDHLFQLLGNDFFPKWKERHQVHFSFSETGPVFHMPPP
CSVVIQESEKGHWHIPVVSEIETHGEGTWLCVTRSHPLKRGLDSSNVDKELHLPHGKGNQ
RSVGSQKRRQIKLEPTGYSSHDGSKQAPQKTYQNLKNILSSSLLADYRSITPQLEAAENC
GGCIIDFQI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcacctgcccacgcctgcaacaaagtcggctccaacttttatcctttgct
cactgcaactactcttctgctttaatcactttcttgaatgtttcaacaacgaagcacgca
ttcgaccgaagattttcaccatttcttcaagttaatgcgcatgttgcccccttggaagca
aggttgcccaagaacacccaccacaatgtctcaagaaacaaccataaagctattgggcag
aatggttctggggtttccgctgatagtctgagggacagaagaattggtgaaagttttcaa
aaaagtagtcattttgatgcagctgtagcggataatgttgagaaaagagttatactgaag
gacagacatgcaaagactagattaaaccccaaaagcagaacagttactagtcctcagttt
tcttcgacgaggtctaaggatggaaatacaggaaaatatgtcaagaaagcacagggaaat
ggacagggcactagcaagaaggaaagaaagccagagaatgaggaccaagttaatcagctg
gaagttgaaagggtaggaaagggttctaagaaaagtaaggctgatacacctggaactgtg
ctgagggcagggctcgatatgtgctctaaaaggggggatgttattggtgcaattaggcta
tatgatttagcaaggaaagaagggatgaatttggggcagtaccattatgctgtacttctc
tatctttgttcttctgctgccacaggtgttgtgcagccagcaaaaagcggtagcggtaat
agaagcttgaatcctctggggttgtccaaggagataaactctgaaaataaagaggggctg
gatttcaatggttttccggctaaggtaaacaatcctgtaagtttttcaaatgactcaaag
ttaccctatcctcaaagtttagatgagatggttcagttcatgaagtctgacactgagcat
gcgaacaaagatgtgatgggagaagaaggttctggaattcaagttactctggatgtcaag
agatacgcacttaaaaggggatttgaaatatataataacatgctttttgataaggttcca
atgaatgaagcgacatttacatctgtggctagaattgcaatgtcattaggagatggagac
ttggcctttgatgttgtaaagcaaatgaaagaattaggaattaaccctcgattgcgatct
tatggtcctgcactgtcagttttctgcaacaatggagatgttgagaaagcgtttatggtt
gaagaacatatgttgcagaatggtgtctgtccagaggagccagaactacaagcacttttg
agagtaagtgtagaaactggaaagagtgagagagtctattatctgttgcataagctaaga
acaagcgttaggcaggtctcgtcttctactgcagatttgatcgagaagtggttcaggagc
aaggtagcttcaagagtggggaagaggaaattgggtcaaagactcataaagaaagcaatg
gaaaatggaggtggcggttggcatgggctgggctggttgggtaaagggcgctggactgtt
tcgcgtacatctgtgggatctgatggcttatgcagatgttgtggagaaaaattagtcacc
attgaccttgatcctgcagaaactgaacattttgccagatcagtgacttcgcttgccata
caaagagataaaaattcaaattttgaaaaatttcaaaaatggctcgattattacggaccg
tttgaagcagtcgtagatggagcaaatattggcctttacactcaaagaaaatttaaacca
tccaaggttaatgcagttgttaatggacttcgtcaaatgcttccatctaagaaatggcca
ctcattgtcttgcataacaggcgtctaactggagataagatgaatgaacctgccaatcga
gcactgattgagaagtggaaaaatgcagatgcactctatgcaactcctactggatcaaat
gatgattggtactggttatatgcagccatcaagtttaaatgcttaattgttacgaatgac
gagatgagagatcacttatttcaacttctgggaaatgattttttccctaaatggaaagaa
agacatcaggtacacttcagcttttccgaaactggtccagtatttcacatgccgccgcca
tgttctgttgtaattcaggagtcagagaaaggccactggcatattccagttgtttcagaa
attgaaactcatggtgagggaacatggttatgtgttacaagatctcacccgctgaaaaga
ggcctagattcttctaatgttgataaagagttgcaccttcctcatggcaagggaaaccaa
agaagcgtgggcagtcaaaagagaaggcagattaagctggagccgacgggatatagcagt
catgatggcagtaaacaggcacctcaaaaaacataccagaatcttaaaaatattctgtcg
tcatctttgttagcagattatcgctcaatcactccacaactagaggctgcagagaattgt
ggtggctgcataattgattttcaaatttga
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