Coffea arabica (coffee): 113695413
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Entry
113695413 CDS
T11342
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
carb Coffea arabica (coffee)
Pathway
carb04145
Phagosome
carb04517
IgSF CAM signaling
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113695413
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113695413
09142 Cell motility
04814 Motor proteins
113695413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113695413
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113695413
04147 Exosome [BR:
carb04147
]
113695413
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113695413
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113695413
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113695413
Exosomal proteins of colorectal cancer cells
113695413
Exosomal proteins of bladder cancer cells
113695413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Tubulin_2
Misat_Tub_SegII
Motif
Other DBs
NCBI-GeneID:
113695413
NCBI-ProteinID:
XP_027070309
UniProt:
A0A6P6SW75
LinkDB
All DBs
Position
6e:complement(22185893..22189592)
Genome browser
AA seq
448 aa
AA seq
DB search
MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
LTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEDGEYEEDEEEEGVDHM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatccttcacgttcaaggaggacaatgtggcaaccaaattggatcaaagttc
tgggaagtagtgtgtgatgagcatgggatagatccaactggacgatatgttggaacctca
gatttgcaattggagcgtgttaatgtgtactacaatgaggcatcttgtgggaggtttgta
cctcgtgctgttcttatggatctggagcccggcactatggacagtgtccgcaccggtcca
tatggccagatcttcaggcctgataactttgttttcggtcagtctggtgctggaaacaac
tgggcaaaagggcattatactgagggtgctgaacttattgactccgttcttgatgttgtg
aggaaggaggctgagaactgcgactgccttcaaggttttcaagtgtgccactcacttggt
ggaggaacaggttctggcatgggtaccttattgatttcaaagatcagggaggagtaccct
gacagaatgatgcttacattctctgttttcccatccccaaaggtttctgatacagtggtg
gagccatataatgccactctttcagtgcatcagcttgttgagaatgcagatgagtgcatg
gttcttgataatgaagctttgtacgatatctgcttcaggactcttaaactgaccactccc
agctttggtgatttgaatcacttgatttctgcaaccatgagtggggtgacttgctgtctc
cgattccctggccaactcaattctgatctcaggaagcttgctgtcaaccttattcccttc
ccccgcttacactttttcatggttggctttgctcctctgacctctcgtggttctcagcaa
tatcgtgctcttacagttccagaactgacccaacaaatgtgggatgcaaagaacatgatg
tgtgctgctgacccgcgtcacggacgctacctgactgcatcagccatgttcagaggcaag
atgagcaccaaggaagttgatgagcaaatgatcaatgtccagaacaagaactcttcctac
tttgtcgagtggatccccaacaatgtgaaatcaagtgtctgtgacatcccacctagagga
ctcacgatggcatcaaccttcattggcaactcaacatcgatccaggaaatgttcaggaga
gtgagcgagcagttcactgccatgttcaggagaaaggctttcttgcactggtatactggg
gaaggaatggatgaaatggagttcacagaggccgagagcaacatgaatgaccttgtttcc
gaataccagcagtaccaggatgccactgcagatgaagacggtgagtacgaggaagatgag
gaagaggagggcgttgatcatatgtga
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integrated database retrieval system