Coffea arabica (coffee): 113695673
Help
Entry
113695673 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113695673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113695673
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113695673
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
HECT type E3
113695673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
113695673
NCBI-ProteinID:
XP_027070608
UniProt:
A0A6P6SX74
LinkDB
All DBs
Position
6e:complement(3741453..3753326)
Genome browser
AA seq
1162 aa
AA seq
DB search
MDEPRKHQVSLRGASAKEISRDALLAKVSQERELRNFSRRATSAALFLQRVWRRHRAVKV
VSMQLQQQWLAEMNQNAICWNKMQISRIVLRPFIFFMTFLSTRYQRIETREEDCVKLCFR
VLLESINSTDPNENFCSLVTGTTEERKIWIYQSKKLILLCLLILVEFDYTDRGLQDVGVV
SLAMRLAVLLTDRKGWKSITERDTQYADAAVKNLIWFIANKESGTYNCIRRYIWKLDPVP
TQGASSGRTDDRFLITASALTLALRPFHFTDTAVTGSGVLELQHAAENYFFFLFTIPWFS
QRLPMVLLPALKHKSVLSSCLRSLLISKDRISKEISEMDRLEIHLQSKKMPQVAWALANI
IFLATSSDDGAVRSGKFAPGLDLVAYVRFVIILAENLLACFGKDGQVRFRNQEIQVDVDN
QVDPIGMGLLESETTCESLKMSYTDLLKPVYQQSHLLGLLNLEKDLSGRMTDTHQSSEAP
MSFELLDVAYYYSCMIRIFSALNPVLGSLPVLNMLSFTPGFLSKLWEVLERSLFPGRSHD
AKDNSFGNDISKSKDDVSQRKQKWCAKDRGNKWVNVLHKFSGNSPTESSKMNSTGKSSFD
RIRDQSSSVWDVEALRRGPVGLSKDMHCLLHLFCAIYSHLLLVLDDIEFYEKQVPFTLEQ
QRKISSMLNTLVYNAVSGSVGPHNRTLMDSAIQCLHLLYERDCRHQFCPPALWLSPGERN
RLPIAVAARTHEVLSATVIPDDASAPSSMASVITLTPHVFPFEERVEMFRELINMDKESR
RMAGEVVGPGPGSVEVVIRRGHIVEDGFQQLNALGSRLKSSIHVSFISESGLPEAGLDYG
GLSKEFLTDIAKAVFSPEYGLFSQSSSSDRLLIPNTAARFLENGIQMIEFLGRVVGKALY
EGILLDYSFSLVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELSLDFTATEE
SLGKRHLVELKPGGKDICVTNENKLQYIHAVADYKLNRQILPFSNAFCRGLTDLVSPSWL
RLFNASEFNQLLSGGNHDIDIGDLRKNTRYTGGYTEGSRTVKLFWEVVAGFEAIERCMLL
KFVTSCSRGPLLGFKHLQPAFTIHKVVCDVPFLATLGGQDVDRLPSASTCYNTLKLPTYK
RLGTLREKLLYAINSNAGFELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggatgagccccgaaaacaccaggtgtcattgcggggagctagcgcgaaggagatttca
agggatgcgcttcttgccaaggtttctcaagagagagaacttcgcaatttttcacgaaga
gcaacttctgccgcactttttcttcagagagtttggcgtcgtcacagggcggtaaaagtg
gtatctatgcagcttcagcaacagtggctagcagagatgaatcaaaatgctatctgttgg
aacaaaatgcagatttcaaggattgttctgaggccttttatcttctttatgactttttta
tctactcggtatcaaagaattgaaaccagagaagaagattgcgtgaagctttgcttcagg
gttttgttggaaagcataaactcaactgatccaaatgaaaacttttgctctttggtaacg
ggtaccactgaagagagaaaaatatggatttatcagtcaaagaagctaattttactatgt
ctactgattttggtggagtttgattacactgatcgagggcttcaagatgttggcgttgtc
tctttagcaatgcgtctagcagttctcttgactgatcggaaaggttggaaaagcataact
gaacgggatactcaatatgctgatgctgcagtaaagaacttaatctggtttattgcgaat
aaagagagtgggacatataactgtattaggagatacatttggaagttggatcctgtacct
actcaaggggcatcttccggtagaacagatgataggtttttgattactgctagtgcatta
actttggctttacggccatttcattttacagacacagctgtaactggtagtggcgtattg
gaattgcaacatgctgcagaaaattatttcttttttttgtttactataccttggttttct
caacgtctgccaatggtgcttctacctgctctgaaacacaagtctgttttatcatcctgt
ctaagatcactgctgatctcaaaagatagaatttcaaaggaaatatctgagatggatcga
ttggaaattcatttgcagtctaagaagatgcctcaagttgcttgggcccttgcaaatatt
atatttcttgcaacatccagtgacgatggtgctgtgcgctctggaaaatttgccccagga
ctggatttagtggcctatgtccgttttgttatcatccttgcagaaaacttattggcttgt
tttgggaaagatggacaggtaagattcaggaaccaagaaattcaagttgatgtagataac
caggttgatcctattggaatgggattgcttgaatccgagacaacttgcgagtccttaaag
atgtcatacacagaccttcttaaacctgtttatcagcagagccatcttttgggactccta
aacttggagaaagatctttctggtcgtatgactgatacacatcaaagttcagaagctcct
atgagttttgaattgcttgatgttgcttattactattcatgcatgattagaatattttct
gcactaaatcctgtgctcgggtcattgccagttctcaacatgttatcttttactcctgga
tttctttcaaaattgtgggaagtattggaaagatctctttttcctggaaggagtcatgat
gccaaggacaattcttttggtaatgatatttccaaaagcaaggatgatgtctctcagaga
aagcaaaaatggtgtgctaaagacagaggcaataaatgggtcaatgtattgcacaaattc
tctggaaactcaccaacagaatcaagtaaaatgaattctactggaaaatccagctttgac
agaattcgagatcagtcttcttctgtgtgggatgtagaggctctcagacgtggtcctgta
ggcttatcgaaagatatgcattgtctccttcatctattttgtgccatatattcacacctg
cttttagttcttgatgacatagagttttatgagaaacaggttccattcacattggagcag
cagcgcaaaatttcatcaatgcttaatacacttgtctataatgctgtatctggcagtgtt
ggcccacataatagaactctgatggattctgcaattcaatgcctacatttgctatatgaa
agggattgcaggcaccagttttgtcctccagctttatggctttcacctggtgagagaaat
cgcctgccaattgctgtagctgctaggactcatgaagttctatctgcaactgttatacca
gatgatgcttcagccccttcaagtatggcttctgtcattactcttactccacatgtcttt
ccatttgaagaaagagttgaaatgttcagagaattgattaacatggataaagaatcccgt
agaatggctggtgaggttgttggacctggtccaggatcagttgaggttgtcatcagacgt
ggacatatcgtggaggatggttttcaacagttaaatgctcttgggtcaaggttgaaatct
agcatccatgtttcatttattagtgaatctggtctcccagaggccggcctagactatggc
ggattatccaaggagttcttgactgatatagcaaaagcagttttctcacctgagtacggg
ctgttctctcagagctcaagctcagatagacttctcattcctaatacagcagcaagattt
ttagagaatggcatacaaatgatcgagtttctgggaagagtagttggcaaagcactttat
gaaggaatattacttgattactccttctcacttgtatttgtacaaaagttgttaggtcgc
tatagctttcttgacgaactgtcaacacttgatcctgagctttacagaaatcttatgtat
gtgaagcattatgatggtgatgtcaaggaactctcactggatttcacagctacggaagaa
tcactcggtaaaaggcatcttgttgagctaaaacccggcggcaaggatatctgtgtgaca
aatgagaataagttgcaatatattcatgcagttgcagactacaaacttaatcggcagata
cttcctttctcgaatgcattttgtagagggttgactgaccttgtttccccatcttggttg
aggttgttcaatgcaagtgaattcaatcagttgctttctggtgggaaccatgacattgat
attggtgatttgaggaaaaatacaagatatactggtggttatacagaagggagtcggaca
gtgaaactcttctgggaggtagttgctgggtttgaagcgatagaacgttgcatgcttctt
aaatttgtgacaagttgttctcgaggtcctctactagggttcaaacacttgcaaccagct
tttactattcacaaggttgtatgtgatgtgcctttcttggcaacattaggaggacaggat
gttgatcggcttccatctgcttctacatgctataatactcttaagcttcccacctacaaa
cgtctaggcactttgagagagaaacttctgtatgccatcaattctaatgctggatttgag
ctttcttag
DBGET
integrated database retrieval system
