Coffea arabica (coffee): 113695724
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Entry
113695724 CDS
T11342
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113695724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113695724
Spliceosome [BR:
carb03041
]
Complex B
Other components
Prp19-related factors
113695724
Complex C
113695724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
AS3MT_C
Motif
Other DBs
NCBI-GeneID:
113695724
NCBI-ProteinID:
XP_027070661
UniProt:
A0A6P6SY79
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Position
6e:8363923..8366647
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AA seq
596 aa
AA seq
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MAALKDLLPPVKSSGSTHYDHSNDPWFKQRYSAAESEKSAIIKANPVPPYLKRTGFKPSK
LEDFGDGGAFPEIHIAQYPLDMGRKRDWKPGSKTLPITVDEHGNVRYDAIVRQNENAKKI
VYSQHTDLVPMVVKDGQDEEEMDLDEKQKEIDETTQSTKTALEKIVNVRLSAAQPKNVPT
QSSDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVM
HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA
LYVAEQKAREAVAMRSKVQKEMMMKEKEKKEMELRELARKARSERTGTAAPAAANMPSER
GTDDMVTDYDRVRDAPREKETKEEREERLQREKIREERRRERERERRLESKDAAMGKKSK
ITRDRDRDISEKVALGMATTGRGGEVMYDQRLFNQEKGMDSGFATDDSYNIYDKGLFTAQ
PTLSTLYRPKKDVDSDTYGGADEQLEKIMKTERFKPDKTFAGTSERTGPRDRPVEFEKEA
EEADPFGLDQFLTEVKKGKKAMDKVGSSGTMKASAGSMRDGFEGSGRTRIAFDKGR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttaaaggaccttcttccgcctgtaaagtcgagtgggtcaactcactatgat
cactcgaatgatccgtggttcaagcagaggtatagtgcagcagagtctgagaaatctgca
ataattaaggcaaatccagttcctccttatttaaaaagaacaggctttaaaccatccaaa
cttgaggattttggtgatgggggggcgttcccggaaattcatatcgctcaataccctctg
gatatggggaggaaaagggactggaagccagggtcgaaaaccttgcccattacagttgat
gagcatgggaatgtgaggtatgatgcaattgtgaggcagaatgagaatgctaaaaagatt
gtgtattcacaacataccgaccttgtccccatggttgtcaaagatggtcaggacgaggag
gagatggacttggatgagaagcagaaggagattgatgagaccactcagagcactaagact
gctcttgagaagattgtgaatgtgaggttgagtgcggctcagcctaaaaatgttcctaca
caatcttcagattctaagtttatcaagtacaagccttcacagcagtcagctgcctttaat
tctggtgcaaaggagaggattattaggatggtggagatgcctgtggaccctttggagcca
cccaagtttaaacataagcgggttccaaaagcatctggttctccacccgttccagtaatg
cactctccacctcggcctgtgactgtgaaggaccagcaagattggaagatcccaccttgt
atttcaaactggaagaacccaaaagggtatacaattcctcttgataagcgtctggcagct
gatggtaggggccttcaggatgttcaaattaatgacaactttgcgaagttatcagaggca
ctgtatgttgcagaacagaaggccagagaggctgtagccatgaggtcaaaggtccaaaag
gaaatgatgatgaaagagaaagaaaagaaagagatggaattgcgtgagttggctcgaaag
gctagatctgagagaactggtactgcagctcctgctgctgccaatatgccttcagagaga
ggtactgatgatatggttacagattatgaccgtgtcagggatgccccaagggagaaggag
acaaaagaggaaagagaggagcggttgcagagggagaaaattcgtgaagagcgtcgtaga
gagagggagagggagcgtaggttggagtcgaaagatgctgcaatggggaagaagagcaag
attacaagggacagagaccgcgatatcagtgagaaagttgctcttggaatggctacaact
gggagagggggtgaagtcatgtacgaccagaggttgtttaaccaggagaaaggaatggac
tctgggtttgccactgatgattcatataacatctatgacaaggggctttttactgcgcag
cctaccctgtctactctctacaggcccaaaaaggatgttgactctgatacttatggaggt
gcggatgagcagctggagaagatcatgaagactgagcgctttaaacctgacaagacattt
gcaggtacctcagagaggactggtcctagagacaggcctgttgagtttgagaaagaggct
gaagaagctgatccgtttggtttggatcaattcttgactgaagtcaagaaaggtaaaaaa
gcaatggataaagttggcagcagtggtacaatgaaagctagtgcaggatcaatgcgagat
ggctttgaaggatctggtagaactcgtattgcctttgataaagggcgttga
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