Coffea arabica (coffee): 113695788
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Entry
113695788 CDS
T11342
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL2-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113695788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113695788
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
113695788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
TMEM89
Motif
Other DBs
NCBI-GeneID:
113695788
NCBI-ProteinID:
XP_027070742
UniProt:
A0A6P6SY64
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All DBs
Position
6e:complement(7764027..7768272)
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AA seq
1377 aa
AA seq
DB search
MEDQQEGENNNNMTKIKRKELGLSCMLNAEVGAVLAVIRRIPEANPQFHHPSEENYDSTI
LQSLKSLRSLIFNTEQEWRKIDPSLYLSPFLDVIQSDDIPAAATGVALSSILKILRLDIF
DEKTPGAKDVMDATVTAITACRLEKTDPVSEEAVMMRILHVLTAVMRHKASVLLTDHAVC
TVVNTCFQVVQQSAHRGNLLQRSARYTMQELIQIIYYRLPDIEVNDWENSESDTEDSNLD
SGFGIRSAVDIFQFLCSLLNVVDIAESEVLHAQTTDGDVQLFALALINSAIELSGDSIGK
HPKLLRMVQDDLFHHLIYYGTYSSPLVLSMICSTVLNIYHFLRRSVRPQLEAFFSFVLFR
AANLGSSPQLQELATEAIVNFCRQSAFINEVYVNYDCDPIFGNAFEEIGRLLCKHAFPTG
GPLTSLQVQAFEGLVLVIHNIAENVDKEDDTSPSGPYPVEITEYTPFWEEISKDDGLEDW
VTFVRVRKAQKKKLLIAGNHFNQDDKKGLEYLKISHLIPDPPDPKAFALFFRFTPRLDKT
LIGDYLGDPDEFHIQVLNEFTNTFVFTGMILDSALRNYLETFRLPGESQKIHRILEAFSE
RFYDQQSSELFVSKDAVFVLCYSLIMLNTDQHNPQVKKKMTEEEFIRNNREINGGSDLPR
EYLSELFHSISSKAITLFGQSGTPVEMNPSRWIQLVNRAKLMKPYVLCNFDRRLGRDMFA
AIAGPSVATLAAIFEQTEEEEILHECIELLFAIARIAQYELEDNLDELICSFCKFTTLLN
PYASAEETLYAFSNDMKPRMATLAVFTIANTFKNSLRGSWRTIVECLLKLRRLKLLPQSV
VEFEIASDASIGTKHDKNESAASISTRNTKFNHIRRSSGLIGRFSHFLSLESVEESLNLG
VSEFEQNQNIIQQCHIENIFTTSSSLPDESLLNLGRALIYASAGKGQKFSTPVEEEETVA
FCWDLIVIISCVNMHRFSTFWPHYHDYLLGVAQFPLFSPIPFAEKAIVAQMKICLKILSA
YQLDKVSEELIFKSINLMWKLEKEILDTCSEFLVKSVSRILNEYPANLQSSLGWKTVLHL
LSVTGRHPETYDQGVESLINLMSDGMHISRTNYASCIECAFGFVALKNSPVEKNIKIMDL
MSDSVKLLVQWFRSGYSDPGSNVSTGSNASTSSTEDTARSGSSASFIMNLFVKLGEALRR
TCLARREEVRNHAVISLQRSFILAEELCFTPANCIYCFNSLIFAMVDDIHEKMLEYSRRE
NAERETRSMEGSLKRAMEVLVEVYSQLLKPISESPHFRPFWMGLLRRMDTCMKADLGGYG
KSDMQEVIPDLLKRIISIMKENELLIPKEGDDLWEITYVQIQWIAPSLKDELFPGAP
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcagcaagaaggagaaaacaacaacaacatgactaagataaaaagaaaggag
ctgggattgtcttgcatgttgaatgccgaggttggagctgttctagctgtgattcgacga
atacctgaagcaaacccccaatttcaccacccttctgaagaaaattatgattccacgata
ctccaatctttaaaatcattaaggtcactcatcttcaatactgagcaagaatggcggaag
attgatccgtctctctacctgtcaccttttcttgatgtaatacaaagcgatgacattcct
gcagcagcaacgggggtggctctttcatccatcctgaagatcctcaggcttgatatattt
gatgagaagactcctggggctaaagatgttatggatgcaactgtgactgcaatcacggct
tgtcgcctggagaaaactgatcctgtttctgaggaggctgtcatgatgagaattttgcac
gtcttgactgctgttatgaggcataaagcttctgttttgctcactgatcatgcagtttgt
actgtggtcaatacatgctttcaggttgtccaacagtcggcccatcgtggcaacttgctt
cagcgcagtgcaaggtacacaatgcaggaactgatccaaataatatattatcggttgcca
gatattgaggtgaatgattgggagaactctgaatcagatacagaagatagcaatttggat
tcggggtttggaattcgctcggctgtggatatctttcaattcttatgctctttacttaat
gtggttgatattgcagagtcagaggttttgcatgctcaaacaactgatggagacgttcag
ctttttgccttggctttgatcaattctgcgatagaattgagtggtgacagcataggtaag
cacccaaagcttttgaggatggtccaagatgacttatttcaccatttaatatactacggg
acgtactcaagcccactagttttgtcaatgatctgcagtactgttctgaatatctaccac
ttccttcgcaggtccgttcgtccacaattagaagctttcttctcatttgttttgttcaga
gctgcaaatcttggaagctctccccaactccaagaacttgcaactgaagcaatcgtgaat
ttctgtcggcaatctgccttcataaacgaagtctatgtgaattatgattgtgatcctatt
tttgggaatgcgtttgaagaaataggcaggttgctttgcaagcatgcattcccaactggt
ggccctttgacaagtttacaggtccaagcatttgaaggccttgtacttgtcattcataac
attgcagagaacgttgataaggaagatgatacaagcccttctggaccatatccagttgaa
atcactgagtatacacctttctgggaggagatttcaaaagatgatggtctagaggattgg
gtgacctttgttagagtaagaaaggcacaaaagaagaagctactcattgctggaaatcac
ttcaatcaagatgacaagaaagggttggagtatctgaaaatttctcacttaatccctgat
cctcctgatccaaaagccttcgctttgtttttccgtttcaccccaagacttgacaagacc
ttgattggggattatcttggtgatcctgatgaattccatattcaagtcctcaatgaattt
acaaatacatttgtatttacaggtatgatattggattcagctttacggaattatttggag
actttcagattaccgggagagtctcagaagattcacagaatacttgaagcattttcagaa
agattttatgatcagcagtcctcggaactttttgtgagcaaggatgccgtgtttgttctt
tgctattctctcatcatgctgaacactgatcaacacaacccgcaagttaagaaaaagatg
acagaagaggaattcatcaggaacaatcgagaaatcaatggcggaagtgatctccctaga
gaatatttatctgagctttttcattctatatcatccaaagcgatcacactctttggtcaa
tcaggtacacctgtagaaatgaatccgagtagatggattcagctagtcaaccgagccaaa
ctcatgaagccatatgtattgtgtaattttgatcgtcgattaggaagagatatgtttgct
gctattgctggaccctcagttgcaactcttgcagcaatttttgagcaaactgaagaagag
gaaattctccatgaatgcattgagttattgtttgcaatagctagaatagctcaatatgaa
ttagaagacaatcttgatgagcttatttgttcgttttgcaaattcactaccttgctcaat
ccttatgcatcagcagaagaaaccctgtatgctttcagcaatgatatgaagccaaggatg
gcgacacttgcagttttcactattgcaaacactttcaaaaattcccttcgaggaagttgg
agaactattgttgagtgcttgttgaaactcagaaggcttaagttacttccacaatctgtt
gtcgaatttgaaattgcttcagatgcatctattggaacgaagcatgataaaaatgagtca
gcagcatctatttcaacccgtaatacaaaattcaaccatatacgccgttcctctggctta
attggtcgattttcacacttcttatcattggagagcgtggaagaatctctaaaccttgga
gtcagtgaatttgaacagaatcaaaacattatccagcaatgccatattgaaaacattttc
accaccagttcaagtttacccgatgaatcattactgaatcttgggcgtgctcttatatat
gcatcagctgggaaaggccaaaagttcagcactcctgttgaggaggaagaaactgtagca
ttctgctgggatttgattgtcatcatttcttgtgttaatatgcacagattctcaaccttt
tggcctcactaccatgattatctgcttggagttgcccaatttcctctgttttcaccaatc
ccatttgcagaaaaggccattgtagctcagatgaaaatctgcctcaagatcctttctgca
tatcaacttgataaagtctctgaggaactcatctttaaatccataaatctaatgtggaag
ttggaaaaagaaattcttgacacttgctcagagtttctagtaaagtcggtgagcagaatc
ctgaacgagtaccctgcaaatttgcagagtagcctaggatggaagacagtcctgcatttg
ttgtcagtcactggacgtcatcctgaaacatatgatcaaggagttgagtcacttatcaat
ttgatgtctgatggaatgcacatatcgcggactaactatgcctcctgtattgaatgtgca
tttggttttgttgcactcaagaatagtccagtggaaaagaacataaaaattatggacctc
atgtctgattcagtgaaattgttggttcagtggtttagaagtgggtactcagatccgggt
agcaatgttagtacgggaagcaacgcaagcacctcttccacggaagacactgcaagatca
ggcagctctgccagcttcatcatgaacttatttgtcaaactaggtgaagcccttcgaagg
acatgcttagccaggagagaagaagtgagaaaccatgcggtcatttctcttcagagaagc
ttcatcctggctgaggaactgtgttttacaccggcaaactgtatttactgttttaacagc
ttgatctttgccatggttgatgatatacacgagaagatgctggaatattcaaggagggag
aatgcagaaagagaaactcgaagcatggaaggaagtttgaagcgtgcaatggaggtctta
gtggaagtttattcgcagcttttgaaaccgatatcagaaagtcctcattttaggcctttc
tggatgggactgttgcgaagaatggatacgtgcatgaaggcagatttgggagggtatggc
aaatcagatatgcaagaggtaataccagatttactaaaaaggattatctcaataatgaag
gaaaacgagttgttaattcccaaagaaggtgatgacctgtgggagataacctatgttcag
atacagtggattgctccgtcactcaaggacgaactatttcctggtgcaccgtag
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