Coffea arabica (coffee): 113695849
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Entry
113695849 CDS
T11342
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
carb Coffea arabica (coffee)
Pathway
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113695849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113695849
04131 Membrane trafficking [BR:
carb04131
]
113695849
03029 Mitochondrial biogenesis [BR:
carb03029
]
113695849
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113695849
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113695849
mRNA cycle factors
P-body specific factors
113695849
Membrane trafficking [BR:
carb04131
]
Others
Actin-binding proteins
Myosins
113695849
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113695849
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113695849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
CbiA
Flp1_like
Motif
Other DBs
NCBI-GeneID:
113695849
NCBI-ProteinID:
XP_071911156
UniProt:
A0ABM4UV38
LinkDB
All DBs
Position
6e:9544327..9560202
Genome browser
AA seq
1526 aa
AA seq
DB search
MASPVNIIVGSHVWVEDPVLAWIDGEVTQINGQDVHVHTTNGKKVVANISKAFPEDTEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQKIPHLYDSNMMEQY
KGTGFGELSPHVFAIADVSYRQMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLE
RSRVCQISTPERNYHCFYLLCAAPPEEKERYKLGNPKIFHYLNQSNCYELDGVNDGEEYL
ATRRAMDIVGINEEEQEAIFRVVAAILHLGNVDFAKGQEIDSSVIKDEKSRFHLDVTAEL
LKCDAKSLEDALIKRVMVTPEEVITRTLDPEAATGSRDALAKTIYSRLFDWIVEKINISI
GQDPNSKSKIGVLDIYGFESFKQNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYEKEQIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFAKNKRFIKPKL
SRTNFTISHYAGEVTYMADLFLDKNKDYVVAEHQDLLTASKCPFVAGLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNELKPAIFENLNVIQQLRCGGVLEAI
RISCAGYPTRRSFDEFLLRFGVLAPEVLDGSYDDKVACQMILDKMGLKGYQMGKTKVFLR
AGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFITTRQAAIQMQSCWRGILARKLYEQ
LRRQAAALKIQKNFRCYVAWKSYSTLQHSAITLQTGMRALSARNEFRYRKQTKAAIKIQA
HVRCYRDWSYYKSLQRAALVTQCGWRARVARRELRKLKMAARETGALKEAKDKLEKKVEE
LTWRLQFEKRLRTELEETKAQEITKLQEALQAMQVQVDEANAKVIKEREAARKAIEEAPP
VIKETPVIVQDTEKVEALTAEVEQLKASLNSERQAAEAAKKASVDAEARNSEQAKKLEDA
ERKVDQLQESLQRHEEKLSNTESENQVLRQQALAMSPTGKTISARPKTTIIQRTPENGNI
PNGETKVAHDMTLAIASPKESESEEKPQKFLNEKQQENQDLLIKCISQDLGFSGGKPIAA
CLIYKCLLHWRSFEVERTTVFDRIIQTIASAIEVSDNSDTLTYWLCNTSTLLMLLQHTLK
ATGAASLTPQRRRSSSASLFGRMSQGLRGSPQSAGLSFLNGRVLGRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVKSLNNYLNIMKANSVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCCSATEEFVGSAWDELKHIRQAVGFLVIHQKPKKTLHEITNELCSELSIQ
QLYRISTMYWDDKYGTHSVSSDVISNMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISK
SMQPVDVADIEPPPLIRENSGFAFLH
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccagttaatattattgttggctctcatgtatgggttgaggatccagtcttg
gcgtggattgatggggaagtaactcaaattaatggtcaagatgttcatgttcacacaacg
aatgggaaaaaagttgttgcaaacatttcaaaagcatttccagaggataccgaagctcct
cctggaggtgtggatgacatgactaagctctcttacttgcatgaaccaggtgttctgcaa
aacctggctaccagatatgaactcaatgaaatatatacatacacaggaaatatattgata
gcagtgaatccttttcaaaaaatacctcacctgtatgatagtaacatgatggaacaatat
aaaggaacaggatttggagagcttagtccacatgtatttgcaattgccgatgtttcatac
aggcaaatgatcaatgagggaaagagcaactcaattttggttagtggtgaaagcggtgct
ggtaaaactgaaacaacgaagatgctcatgagatatcttgcatacctgggtggtcgttct
ggagttgaagggcggacggtcgaacagcaagttctagaatccaatcctgttcttgaagca
tttggaaatgctaaaactgtgaggaacaataactcaagtcgttttggtaaatttgttgag
atacaatttgataagagcgggaggatatctggggcagctatacgaacttacctgctggaa
agatctcgtgtatgccagatctctactcctgagagaaattaccactgcttttatcttctt
tgtgcggcaccaccggaggagaaggagaggtataagttgggaaatccaaaaatatttcac
tatctcaatcagtccaattgttatgagcttgatggagttaatgatggtgaagaatatctt
gcaacaagaagggctatggatatagttggaattaatgaggaagaacaggaggcaatattc
agggttgtggctgcaattcttcacctgggtaatgttgactttgcaaaggggcaggagata
gattcttctgtgatcaaggatgagaaatctaggttccatcttgatgtgacagctgaattg
ctcaagtgtgatgctaagagcttggaagacgcactcattaagcgtgtgatggtgacacct
gaggaggttatcacaaggactcttgatccagaagcagctactggtagcagggatgctttg
gctaagacgatatattctcgtctatttgactggattgtggagaaaataaatatatcaatt
ggtcaggatccgaactcaaaatcaaaaataggagttcttgatatatatgggtttgaaagt
tttaagcagaatagctttgaacagttctgcattaattttaccaatgaaaagctgcagcaa
catttcaaccagcatgtatttaaaatggaacaagaagagtatgagaaggaacaaattaat
tggagctacatagagtttgttgataaccaagatgttttggatctgattgaaaagaaacct
ggaggaatcattgcacttctggatgaagcatgcatgttccccaaatcgacccatgaaaca
tttgctcagaagttgtaccaaacatttgcaaagaataagcgcttcatcaaacctaagctt
tcgcgcaccaattttacaatatctcactatgcaggagaggttacatatatggcagatctg
tttctggataaaaacaaagattatgtggtggcagaacatcaggatcttctgacagcttca
aagtgtccctttgtagctggtttatttcctccacttcctgaagaatcatcaaagtcgtcc
aaattttcttctattgggtcccgctttaagctacaactccaatctttaatggagaccttg
agttcaacagaacctcactacattcgatgtgtgaagcccaataatgaattgaagcctgct
atttttgagaatctgaatgtcatccagcagttgcggtgtggtggtgttctggaagctatc
agaatcagctgtgctggataccccactaggcgaagtttcgatgaatttcttctgcgattt
ggtgttcttgctccagaagttctggatggaagctatgatgacaaggttgcgtgccaaatg
attctggacaaaatgggattaaaaggctatcagatgggcaagacaaaagtcttcctaaga
gctggtcaaatggctgagctagatgcgagaagagcagaggtccttggaaatgcagccagg
attattcaaagacagattcgaacttacattgctaggaaagagttcatcacaactcgccag
gcggcaattcaaatgcaatcatgttggcgaggtatattggctcgcaagctatatgaacaa
ttacgccgtcaagcagctgctctgaagatacagaagaacttccgctgttacgttgcttgg
aaatcgtactcaacattgcagcattctgctatcacattgcagacaggcatgagagcattg
agtgccaggaatgaattcagatatcggaaacaaacaaaggctgctattaaaatccaggct
catgtgcgttgctacagggattggtcttactacaaaagtctgcagagggctgctcttgtt
actcaatgtggttggagagcacgagtggcaaggagggagcttcgcaagcttaaaatggcc
gcaagggaaactggtgctctcaaagaagcaaaggacaagctggaaaagaaggtggaagaa
cttacgtggcggttgcaatttgaaaaacgattacggactgaactggaagaaacgaaagcc
caggaaattacgaagttacaggaggctttgcaggcaatgcaagttcaagtagatgaagca
aatgctaaagttattaaagaacgggaagcagcaagaaaagccattgaagaagctcctcct
gtgattaaggaaacccctgttatagttcaagatactgaaaaagttgaagcattaacagct
gaggttgaacaattaaaggcttcattgaattctgaaaggcaagctgcagaagcagcaaag
aaggcttctgtagatgctgaggccagaaattcagaacaggctaaaaaacttgaagatgca
gaacggaaagtggatcagctgcaggagtctctgcagaggcatgaagagaagctctcgaat
actgaatcagagaatcaagttcttcgtcaacaagctttggcaatgtctcccactggaaaa
actatatctgcaagaccaaaaacaactattatacagagaactccagagaatggaaatatt
ccaaatggtgaaaccaaggttgcacatgacatgactcttgctatagccagtccaaaagag
tctgaatctgaggaaaaaccacaaaagtttcttaatgaaaagcagcaggagaaccaagac
ttgctcatcaagtgcatctctcaagatttgggattttctggtggcaaaccaattgctgct
tgtttgatttacaaatgccttcttcattggagatcatttgaagttgagagaactacagtg
tttgacagaatcatccaaacaatagcttcagcaatagaggtctcagacaacagtgataca
ttaacttactggttgtgtaatacttctacgctgttaatgctgctccaacacacactcaaa
gccactggggcagctagtttgactcctcaaaggcggaggtcatcatcagcctcacttttt
gggaggatgtctcaaggattacggggatctccacaaagtgctgggctctcatttcttaat
ggccgggtgcttggtagactagatgacttgcgtcaagttgaggctaaatatcctgctttg
ctgttcaagcagcagcttactgctttccttgagaagatctatgggatgataagggacaat
ttaaagaaagagatttctccattgcttggcttgtgcatccaggctcctaggacatctcgt
gctagtttggtaaaaggacgctctcaagctaatgctgttgctcaacaagctttgattgct
cattggcagagcattgtgaaaagcctaaataattacttgaacataatgaaagcaaactcc
gttcctcccttcttggtccgcaaggttttcactcagatattttctttcatcaatgttcaa
ctttttaacagtcttcttttgcggcgtgagtgttgctccttcagcaatggggagtatgtc
aaggctgggctcgccgaattagagcaatggtgttgttctgcaactgaagaatttgtaggc
tccgcatgggatgaactgaagcatatcagacaggctgttggcttcctagttattcatcaa
aagcccaaaaagacattgcatgaaatcacaaatgagctttgttcggagcttagcatacag
cagttgtacaggataagtacaatgtactgggatgacaagtatggcacccacagcgtttct
tcagatgttatttcaaatatgagagttatgatgacagaggactctaacaatgcagttagc
agttcctttttgttggatgatgactcaagcatcccattctctgtggatgacatctccaaa
tcaatgcaaccggtggatgttgctgacattgagcctccgccactaatccgagagaattca
ggttttgcatttttgcattag
DBGET
integrated database retrieval system
