Coffea arabica (coffee): 113695865
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Entry
113695865 CDS
T11342
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X3
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113695865
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113695865
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113695865
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113695865
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113695865
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113695865
Prokaryotic type
113695865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
113695865
NCBI-ProteinID:
XP_027070846
UniProt:
A0A6P6SYS6
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All DBs
Position
6c:3759693..3771463
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AA seq
943 aa
AA seq
DB search
MENLAEMMRISQVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNALWVPGMDHAGIA
TQVVVEKKLKKEMNKTRHDFSRQEFVDEVWKWKNKYGGTILKQLRRLGASLDWSRECFTM
DEQRSKAVTEAFVRLYEEGLIYREIRLVNWDTILKTAISDIEVLHDDVFGRELRQIPGYK
DPVEFGVLTSFAYPLEGDLGEIVVATTRVETMLGDTAIAVHPDDKRYKHLHGKFAIHPFN
GRKLPIICDAILVDMHFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINRNGGSE
FAGMLRFEARVALTEALKKKGLYRGFKDNPMRLGICSRSQDVVEPLIKPQWYVNCKGIAK
EALDVVMNDDNRKIEIIPKQYAAEWKRWLENILDWCISRQLWWGHQIPAWYVTLKDDEQK
EIGSYNGRWVVARNEKEAQEEAQQLFPGKQFQLSQDPDVLDTWFSSGLFPLTVLGWPDDT
KDLRTFYPTSVLETGHDILFFWVARMVMMGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSL
GNVIDPLDVITGITLEELHKKLEESNLDPTELEKAKEGQVKDFPNGIPECGADALRFALV
SYTSQSDKINLDIQRVVGYRQWCNKLWNAIRFAMGKLGDDYTPPVDVVPDVIPFSCQWIL
SVLNKAISKTVLSLDSYEFSDAATAIYSWWQFQLCDVFIEVIKPYFSSKDSEFVSEKKFA
QDTLWVCLDTGLRLLHPFMPYITEELWQRLPSRSDCARKESIMICDYPSTVEVWNNDTVE
SEMDLVEAVVKSLRSIRSLLPANERHERRSGFVLCRSNGATGIIQRRQLEISTLASLSSI
TVLSENDVSPAGCAVSVVNEVVSVYLKLRGSINAEAEREKLKIKMEEIQKQRDSLEKMMN
ASGYKEKVPAHIQEENVAKLSSLMKEILSFEEAFQHLERKMET
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctagcagaaatgatgaggattagtcaagtcctgccaccaccgaatgtgact
ggagctctacatattggccatgcccttactgctgccattcaggataccattattcgttgg
cgtagaatgtctggatacaatgccttgtgggtgcctgggatggatcatgctgggattgca
acacaggtggtggtggagaagaagctcaagaaagaaatgaataagacaagacatgacttt
agtcgtcaggagtttgtagatgaagtctggaagtggaaaaataagtatggtggcaccata
ttgaaacaacttaggcgtttaggtgcatctcttgattggtctcgtgagtgctttaccatg
gatgagcaaaggtcaaaagcagtgactgaagcttttgtaagactctatgaagaaggtctc
atatatagggaaatccgacttgtgaactgggataccattttgaaaactgcaatatctgat
attgaggtactgcacgacgatgtatttgggagagaactacgacagatccccggttacaaa
gaccctgtggaatttggtgttctcacgtcttttgcatatcctcttgaaggggatcttggt
gagattgttgtagccactacaagagttgagacaatgctaggggataccgctattgctgta
catcccgatgacaaaagatacaagcaccttcatggaaaattcgctattcacccatttaac
ggaaggaagcttcctattatttgtgatgcaattcttgttgacatgcactttggtactggt
gctgttaagataactccagcccatgatccaaatgattttgaggtcggtaagcgacataat
cttgaatttattaatatttttactgatgatgggaagattaataggaatggaggctcagaa
tttgctggtatgctgcgctttgaagcccgtgtggccttgactgaagctttaaagaaaaag
gggctctatcggggttttaaagataatccgatgcgccttggtatttgttctagaagccag
gatgtggtggagcccctaataaagcctcagtggtatgtcaactgcaaagggatagctaag
gaagctcttgatgttgtcatgaatgatgataacaggaaaattgaaatcatccccaagcag
tatgctgcggagtggaagagatggcttgagaatattcttgattggtgcatctcaagacag
ctttggtggggtcatcaaattcctgcctggtatgtgactctgaaggatgatgaacagaaa
gaaattggttcctataatggccgctgggtggttgcgcgaaatgagaaagaggcccaagag
gaggctcaacaacttttccctggaaagcagttccagttgtctcaagatcctgatgtgctg
gatacctggttttcttctggtttgtttccattgactgttttgggatggccagatgatact
aaagacctaaggacattttatccaacttctgttcttgaaactggtcacgacattcttttt
ttctgggtggcacgcatggttatgatgggaattaagctgggtggcgatgtacctttcaga
aaggtttatttgcacccaatgattcgtgatgcacatgggcgtaagatgtccaagtcattg
ggaaatgtgatcgatccccttgatgtaattactggaataacgctggaagagcttcataag
aaactagaggagagtaacttggatcctacagaactagagaaagctaaagaaggacaggtg
aaagattttcccaatggtattcctgaatgtggtgcagatgctcttcgttttgcccttgtg
tcctatacatctcagtctgataaaattaatctagatattcaaagagtggttggatatcgt
cagtggtgtaacaaactgtggaatgctataaggtttgcaatgggcaaacttggagatgat
tacacacctccagtagatgtagttcctgacgtcattccatttagctgccaatggatactc
tcagtgttgaacaaagccatatcaaaaactgtcctttcccttgattcatatgaattctca
gatgcagcaacagcaatatactcatggtggcagtttcaattatgtgatgtgtttattgaa
gtgatcaagccttatttttctagcaaggattcagaatttgtatcagagaaaaaatttgcg
caagacactttatgggtatgtttggatactggattacgattacttcatccattcatgcca
tacatcacagaagagctgtggcagcgcctgccttctagaagtgattgtgcaaggaaagaa
tctattatgatatgtgattatccatccactgttgaggtgtggaataatgacacagttgaa
tctgagatggatctggttgaagctgttgttaaatccctgaggtcaataaggtcattgttg
cctgcaaatgaaagacatgaaaggcggtcagggtttgtcctttgtcgatccaatggtgcc
actggtatcatccaacgccgtcagctggagatttcaacactagcatctttatcatcaatt
acagttttaagtgagaatgatgtctctccagctggatgtgcagtatctgttgtaaacgaa
gtggtatctgtctacctgaaacttcgagggagcattaatgctgaagctgagcgtgaaaag
ctgaagataaagatggaggagattcaaaagcaacgggatagcttagagaaaatgatgaat
gcttcagggtacaaggagaaagtaccggcccatatccaggaagagaatgttgcaaagctt
tcctcactgatgaaggaaattttatcttttgaggaagcattccaacatttggaacgtaaa
atggaaacatga
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