Coffea arabica (coffee): 113695889
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Entry
113695889 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K08518
syntaxin-binding protein 5
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113695889
Membrane trafficking [BR:
carb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113695889
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113695889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_WDHD1_1st
WDR55
Beta-prop_VPS8
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Synaptobrevin
Beta-prop_RSE1_2nd
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
113695889
NCBI-ProteinID:
XP_027070879
UniProt:
A0A6P6SXT8
LinkDB
All DBs
Position
6e:1007696..1020761
Genome browser
AA seq
1107 aa
AA seq
DB search
MLAKRLFQKAAALHHHHHPPPPHNAGSCLTPEDVDFRINVHHGIPSTASILAFDPIQNLL
AVGTLDGRIKLIGGDNIEGLLISPEQHAYKYLEFIHNEGSLISITIDNSIQVWNLKSRCL
ACSLCWESNITAFSIISSSNLMYVGDEYGVISVVKYDAENAELLHLPYHIPSEAVGFSVP
FHQPVVGVLPQPCSSGTRVLIAYQTGLIILWDVLEAQIVIVRGNKVLWLKNEVDNPSNGD
LGLPHDASHELEEKEITALCWASCDGSILAVGYIDGDILFWKTSTSVPGKGQQSGLSEQV
VKLQLSSAEKRLPVIVLHWWANYKSHRDSDGQLLIYGGDEIGSEEVLTVLSVEWSSGMGT
IQCLSRVDLSLSGPFADVVITAGTLRSAKTASLFVLTNPGHLQIFEVADSSASESQQEKK
LSVSAVDIPPVVPTINPLITVANLFCLPIDEDSSKALAEIFRIRKSSSTKKLSGGTSFPL
TGGVCTHLSSDKDYRIWRVYVAGYHDGSVRIWDATYPVLSSLCVLQNEIRGTNAAISIAS
VSKLEFCIHTLRLAVGDECGLVRIYDLHSSKETHFHFVTETKNEVEQLAQEEGPICRAAF
NIIDSQVQALKFTNSGAKLAAGYECGRIAVLDMNSFSTLFLADTVSCPISMMSVICDIVI
HQVGSSYRSGSNANDQTKNLMVILTKDGAVYTIDADNGHLISSRPMRLSKDRTAVSMHVI
ESCSRESSTSFGMKKEHACKDEMVTNEPTQDISTNRNDKSETENQSSDNKSSQHLEDLLV
LLCCKDMLHLCTAKHIVRGDKKPIYKVKLTKPCCWTTIFVKDDRVCGLILLYQTGEIEIR
SIPYLELVKETSLASLLRWNFKANMEKTMSSTETGHLTLVNGSELVFLSILLSENDYRIP
DSLPSLHDEVLASATRAAITYSLKHKKKPGGGPRILSGIVKGFKREKLNQAMELACITEP
CSSHLEDVFVRNLTPDPSAMSKDYQDAAELNIDDIEIDEPVHLAPTSSHEVQYDNREGRK
DREKLFNEDSSDMKPRLRTREEILATYRKAGDASSVAGQARNKLLERQEKLQRISKQTED
LRNGAEDFASLANELVKVMENRKWWQI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaaaacgcctatttcagaaggccgcagcgcttcatcaccatcatcatcccccg
cctccgcacaacgcaggcagttgtcttacaccggaggatgtggatttccgcatcaatgta
catcatggtatcccgtcgacagcatccattctcgcttttgatcctattcagaatttattg
gcggttgggacattggatggtaggataaaattgattggtggtgataatatagaaggcctc
ttgatttctcctgagcaacatgcatacaaatatttggagtttattcacaatgaaggttct
ttgatcagcataactattgataacagtattcaggtatggaatctgaaaagtaggtgtcta
gcatgcagtttatgctgggaatcaaatataactgctttctcaataatcagcagctccaat
cttatgtatgttggagatgaatatggagtaatctctgttgtgaagtatgacgcagaaaac
gctgagcttttgcacttgccatatcatataccttcagaggcagttggattttcagttcct
tttcatcaacctgtagttggagttcttccccaaccttgttcttctggaactagagtatta
attgcctatcagactggattaattattctttgggatgttcttgaagctcagattgtcatt
gttagaggtaataaggttctgtggttgaagaatgaagttgacaatccaagtaatggagat
ttgggccttccacatgatgcatctcatgaattagaggagaaagagataactgctctttgt
tgggcatcctgtgacggatccattcttgctgttggatatatagatggagatatcttgttt
tggaaaacgtcgacttctgtccctggtaaaggccaacaatctggattatcagagcaggtg
gttaagctgcaattatcatctgctgaaaagaggcttccagtgatagtgttgcactggtgg
gcaaattacaagtctcaccgagacagtgatggtcaactacttatttatggcggtgacgag
ataggatctgaggaggttctgacggttctcagtgttgagtggtcatctggaatggggact
atccaatgtcttagtcgtgtggacctctctctttctggtccctttgctgatgtagtaata
accgctgggaccttgaggagtgcaaaaactgcttctctatttgtattgacaaaccctggg
cacctacaaatatttgaagttgctgactcatctgcctcagagtcacagcaggaaaagaaa
ttatctgtttctgctgtagatatccctccagtagtaccgacaataaatcctctcataact
gtggctaatctcttctgtttacccatagatgaagactcgtcgaaggctctcgctgagata
ttcagaattaggaaatctagttcaacaaagaagttgtctggaggcacaagcttccctttg
actggaggcgtatgcactcatttatcatctgacaaagattaccggatttggagagtatat
gtagctggttatcacgatggatctgttcgtatatgggatgccacttatccagttctgtca
tccttatgtgtattgcaaaatgagattaggggcacaaatgcagctatttcaattgcttca
gtatcaaaattggagttttgcatccatactcttagattagctgttggtgatgaatgtggt
ctggtccggatatacgatttgcatagcagcaaagaaacacacttccattttgttacagag
actaaaaatgaagttgaacagttggctcaggaagaaggacccatttgcagagctgcattt
aatattattgattcccaagttcaagcattaaaatttacaaactcgggggccaaacttgca
gccggatatgaatgtggtcgtattgcagtgcttgatatgaattccttctcaaccttgttt
ttagctgacacagtatcctgcccaatctccatgatgtcagtaatttgcgacatagtcata
caccaagttggtagttcataccgatctgggtcaaatgcaaatgatcaaacaaagaatcta
atggtaattttaacgaaggatggagcagtttatacaattgatgctgataatggccactta
atcagctctcgaccaatgcgcttgagcaaagatagaactgcagtttccatgcatgttata
gaaagctgtagcagagagtccagtacatcatttggaatgaagaaggaacatgcttgcaag
gatgaaatggtcactaatgaacctactcaggacatcagtacgaatagaaatgacaaatct
gagactgaaaatcagtcttcagataataagtcctcccagcatttagaggatttgctggtt
ttgctttgttgcaaggatatgttgcatttatgtactgcaaagcatattgttcggggagac
aaaaaacccatttacaaagtcaagctgacaaagccttgttgttggacaacgatttttgtg
aaagatgatagagtttgtggactgattctgctctatcaaacaggagaaattgagatcaga
tctataccctatttagaactagtaaaagagacctctttggcctcacttttgaggtggaat
ttcaaggcaaatatggagaagacaatgagttccacagaaactgggcatcttacactggta
aatgggtctgagctggtgttcctttccatattgctgagtgaaaatgattacaggattcca
gattctttgccttctctccatgatgaagtgcttgcatctgcaaccagggctgctattacg
tattctttgaagcataagaaaaaaccaggtggtggccccagaattctcagtggtattgtc
aaaggttttaagagagaaaaactaaaccaagcaatggaacttgcttgtattactgaacct
tgttcaagtcatttagaagacgtctttgtgaggaatctaacccccgatccatcagcaatg
tctaaagattatcaggatgctgctgaacttaatatagatgacatagaaattgatgaacct
gtgcatctggcacctacttcatctcatgaagtgcaatatgataatagagaaggtagaaag
gatcgagagaagttgtttaatgaggacagcagtgacatgaaaccgagacttagaactcga
gaagaaattttagcaacatacagaaaagctggggatgcttcatcagtggctggacaagca
agaaacaaacttttggaacgccaggaaaaacttcagaggatcagtaaacaaacagaggat
ctgcgaaatggagctgaagactttgcatctttagctaatgagcttgtaaaagtaatggaa
aacaggaaatggtggcagatatga
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