KEGG   Coffea arabica (coffee): 113695896
Entry
113695896         CDS       T11342                                 
Name
(RefSeq) aladin-like isoform X3
  KO
K14320  aladin
Organism
carb  Coffea arabica (coffee)
Pathway
carb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113695896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113695896
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113695896
SSDB
Motif
Pfam: Beta-prop_Aladin ANAPC4_WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_WDR19_1st WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_WDR3_1st WDR55 eIF2A Tricorn_2nd PD40 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Lactonase WD40_Gbeta
Other DBs
NCBI-GeneID: 113695896
NCBI-ProteinID: XP_027070890
UniProt: A0A6P6SYJ8
LinkDB
Position
6c:complement(63096448..63108136)
AA seq 502 aa
MAAFHSASPSSSPLLLLLLIPAVGTKARRERASKIEAFLCSSPTPIPYTPTHSQNPSEKM
ALSYPQPGSVTICEINRDLITADNLSDDRAEETYAKILGTVFSPVPFQYETLLTVEEQEV
AAAAQTKGGLLSAALQAVSTASLRPLFLLTPPVKLLQDVDLYGLSWHQHKNILAFVSGPN
HVTIRDYEDSDGKDPCVLINESQKQVKSLEWRPNGGRMLSVACKGGICIWAASYPGNPAL
VRGGVTSSTLSRGSGTRWTLVDFLQSHDGEQISSLSWSPDGRYLASASFENSSFTIWDVA
QGLGRPIRRGLGGMSLIKWSPSGDYFIAAKFDGTFHIWETNTWTSEPWSSTNGFVTGATW
DPDGQMILIAFSESTTLGSLHFASKPPSLDAHLVPVELQEIQSLTRSKGIEKIAWDGSGE
RLALSFKDGDDLYKGLVAIYDVRRTPLISASLIGFIRGPGVNPKPIALSFHDKFKQGPLL
SVTWSSGMCCTYPLIFRTHVLP
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggcggccttccactcggcatctccatcttcctctccgctactactgctgctgctcatc
cctgctgttgggaccaaagcgcggcgggaaagagcatcaaaaatagaggcgttcctttgt
agtagtcctactcctataccctacacgcccacacactcacaaaatccatcggagaaaatg
gcgttgtcgtatccacagccaggctccgtcaccatctgcgaaatcaatagagacctcatt
actgccgacaacctgtccgatgatcgggccgaagaaacctatgccaaaattcttgggact
gttttcagtccggttccatttcaatacgagactctattgacggtggaggagcaggaagtt
gctgctgctgcccaaactaaaggtggattgctgtcggctgcactgcaggccgtctccact
gcttctctccgaccccttttcctccttactcctcctgtaaaattgttgcaagatgttgat
ctctatggcctgagctggcaccaacacaaaaatattttggcttttgtttctggcccaaat
catgtgacaattcgcgattatgaggattcagatggtaaggatccttgtgttctgataaat
gaatcccaaaaacaagttaaaagtcttgagtggcggcctaatggtgggaggatgctttct
gtggcatgcaagggtgggatttgcatttgggctgcttcatatcctggtaatccagctttg
gttagaggtggagttacttcaagcaccctttcgagaggctctgggactagatggactctg
gtggatttccttcaaagtcatgatggtgaacaaataagttccctgtcatggagtcctgat
ggaagatatttggcatcagcttcatttgagaattcatcattcaccatttgggatgttgct
caagggctgggcagacctattcgacgtggcttggggggcatgtcactgattaagtggtct
ccttctggagattactttatcgctgcaaaatttgatggaacatttcatatctgggagact
aacacttggacatcagaaccatggtcctcaacgaatggttttgtaacgggagcaacatgg
gatcctgatggacaaatgatactcatcgctttctctgagtctacaacattagggtctctt
cactttgcatcaaagcctccatcccttgatgcacaccttgtacctgtagagttgcaagag
attcagtccttgaccagaagtaaaggaattgagaagatagcatgggatggttcaggagag
cgattggctttgtcattcaaagatggggatgatctgtacaagggtcttgtggcaatatat
gatgttaggagaacccccctgatttcggcatcactaattggatttattagaggccctggc
gttaatcccaagccaattgcactgtcatttcatgacaagttcaaacaagggcccttgcta
tctgtgacttggagcagtggaatgtgctgcacctacccactcatattccgcacgcacgtt
ttaccttaa

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