Coffea arabica (coffee): 113695931
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Entry
113695931 CDS
T11342
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113695931
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
carb01001
]
113695931
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113695931
03029 Mitochondrial biogenesis [BR:
carb03029
]
113695931
Enzymes [BR:
carb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113695931
Protein kinases [BR:
carb01001
]
Serine/threonine kinases: Other
ULK family [OT]
113695931
Membrane trafficking [BR:
carb04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
113695931
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113695931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
ABC1
ATG1-like_MIT2
Kdo
Pkinase_fungal
APH
TPR_1
FragX_IP
DUF2746
Motif
Other DBs
NCBI-GeneID:
113695931
NCBI-ProteinID:
XP_027070955
UniProt:
A0A6P6SYR9
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All DBs
Position
6e:complement(1709293..1717785)
Genome browser
AA seq
734 aa
AA seq
DB search
MAQPMSRGGRFVVGEYVVGQQVGAGSFSTVWHGRHRVHGTEVAIKEIVTARLNTKLRDSL
KSEIVILKKINHPNIIRLHDMIEDSGKIYIILEYCRGGDLSVYIQKRQGGIPEATAKHFM
QQLASGLKVLRENNLIHRDLKPQNLLLSTNDDKSILKIADFGFARSLQPRGLAETLCGSP
LYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPYTGNNQLQLFQNIVRSTELQFPRDI
KDLSPHCIDLCRKLLRRNPVERLTFEEFFNHPFLSQRQADELLWNMRRQKSIDGFPLCEL
NPVGKTEEIAQEDLPFSLDDDSSGPDGSPSFVGMSPIKSTYGFSLDAKADRKEASKAAEK
MDFASNYGSVSHKPEATMFNIGGLKLSEGKLKESLKSVDPAPAKSHIKVADSLELIDQEY
VLVPGPPLDVSSSPVISTLENVSSKPGSPPQVSGNINLISTAPMPIVGTAANKVGHIESF
ESHGSAPGTSQESMDVADTLEQPSADCITRVRSLKCCASAIRELVNEKLEAGKQLEAFSV
QLVILAIWKQALHICHTRAASAMEGSPTPDSTRLREMTKEQDGLDIHEDLDAADTLGSQH
ICSQIERAFLLEVGNAEELAKIVEPGITCYQGNTEMPDAMETIFQSALALGRRGAVDEYM
GRTDDAVVFYSKAVRLLVFLLVEAPSLILNPPFSLTDSDRYRLQSYIDVLNNRQSISRSQ
RMALLKGGDQQCSS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccgatgagcagaggaggaaggttcgtggtgggggaatatgtggttgggcag
caagtaggagcggggtcgttctcgacggtatggcacgggcggcaccgggtccacggcacc
gaagttgccatcaaagagatcgtgacggctcgattgaacaccaaactccgggatagtttg
aagtcggagattgttattttgaagaagatcaatcacccaaacatcatccgcttgcacgac
atgattgaggattctggaaagatatatatcattctagaatactgcagagggggtgacctt
tctgtttacatccaaaaacgtcaaggaggaattccagaagcaactgctaagcacttcatg
cagcaactggcttctgggcttaaagtacttcgagagaacaacctaattcaccgagacctg
aagccacagaatctattgctttctacaaatgatgacaaatccatcctgaagattgctgat
tttggatttgcaaggtccctgcaacctagagggcttgctgaaaccttatgtggttcaccg
ctttacatggctccggaaataatgcaactccagaagtacgatgcaaaggcagatctttgg
agtgttggcgccattctatttcaactggtgactggaaaaaccccatatacaggaaacaac
caactacagttgttccagaacatcgtgagatcaactgaattgcagtttccccgagacata
aaggatttgagtcctcattgcatagatttgtgtcggaaattgcttcgtcgtaatccagtg
gagcgattgacatttgaggaattctttaaccaccccttcctttctcaaaggcaagcagat
gaattgttgtggaatatgagacgacagaaaagtatagatggttttcctctttgtgaactg
aatcctgtggggaaaaccgaagaaattgctcaagaagatttaccttttagtttagatgat
gattccagtggtcctgatgggagtccctcttttgttgggatgtccccaattaaatctaca
tatggattttctcttgatgcaaaagctgacagaaaggaagcttctaaagctgcagagaag
atggattttgcttccaattatggtagtgtcagtcataaaccagaagcaactatgtttaat
attggtggtctgaaactttcagaaggaaagctgaaagagtctcttaaatccgtggatcct
gcaccggcaaaaagtcacataaaagtggcagattcattggagttgattgatcaggagtat
gtcctggtacctggtccaccattggatgtgtcttcttcacctgttatttctactctcgag
aatgtgtcttccaaacctggcagtccaccacaagtttctggaaacataaacctcatctca
actgccccaatgccaattgttggtacagcagccaataaggtgggtcatattgaaagcttt
gaaagtcacggctctgctcctgggacttcacaagaatctatggatgtagctgacacatta
gagcagccatcagctgactgcatcacaagagtaagatccttaaagtgttgtgcatctgcc
atcagagaactagtaaatgagaagcttgaggcaggtaagcagctggaagcattctcagtt
cagcttgtgattcttgccatatggaagcaagcattacacatctgtcatacacgagctgca
tctgctatggagggaagtccaacacctgattctaccagattgagggaaatgacgaaggaa
caagacggccttgatattcatgaagatcttgatgcagctgacactctgggttctcagcat
atttgctctcagattgagagagcgtttcttcttgaagttgggaatgctgaggaacttgca
aaaattgtagagcctggtattacatgttaccaaggaaatacagagatgccagatgcaatg
gagacaatattccaatctgcccttgctctgggcagacgcggagctgtagatgaatatatg
ggtcgcacggatgatgctgtggtgttttactctaaagctgtgcgcttgttagtatttctt
ctagtggaagcaccttcccttattttgaatcctccgttttctctgacagattcagaccgt
tataggcttcaaagttacattgatgtcctgaataacaggcaaagcatttcaaggtctcaa
aggatggcccttctgaagggcggggaccagcaatgctcctcctga
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