Coffea arabica (coffee): 113696042
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Entry
113696042 CDS
T11342
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113696042
Membrane trafficking [BR:
carb04131
]
Protein recycling
Others
EARP complex
113696042
Endosome - Golgi transport
Tethering complex
GARP complex
113696042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
COG4_N
MUN
Vps54_N
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
113696042
NCBI-ProteinID:
XP_027071159
UniProt:
A0A6P6SYN4
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Position
6e
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AA seq
820 aa
AA seq
DB search
MEVMDKQSALDYINQMFPTEASLSGVEPLMQKVQSEIRHVDAEILAAVRQQSNSGSKARE
DLAAATHAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRQYKEAAAQVEAVNQLCSHFEAYRDIPKITELREKFKSIKQILKSYV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYQQIFEGAE
LAKLDKAERRYSWIKRRLRTNEEIWKIFPASWHVAYLLCIQFCKLTRKQLVDILDNLKEK
PDVGTLLLALQRTLEFEEELAEKFGGGVQNREKKTDTEEADRGDNVSDIRKKYEKKLARH
QGSGEEEPDGCKDLSAPAAGFNFRGIISSCFEPYLIVYVELEEKTLMENLEKLVQEETWE
IEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFARLPK
GGTGIVAAATGMDGQIKTSDKDERVICYIVNTAEYCHKTSGELAENVSKLIDPQFVDKVD
MSEVQDEFSAVITKALITLVHGIETKFDAEMLAMTRVPWSTLESVGDQSEYVNGINTIFS
SSIPALGTLLSSIYFQFFLDKLASSLPPRFYSNIFRCKQISETGAQQMLLDTQAVKTILL
DIPSLGRQTSGASSYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTPTEFQRIL
ELKGLKRTDQQSILDDFSRRGSGITQPAIAGPSAVPSAPPPSAAPAITSPVVVGSLISRE
DVLARAAALGRGAATTGFKRFLALTEAAKDRKDFRKLFTG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaatggacaagcaaagcgctttggattacatcaatcaaatgttcccaacagaa
gcatctttatcgggtgttgagccacttatgcagaaagtacaaagtgaaattcggcatgtt
gatgctgaaattttagcggctgttcgtcaacagagtaattcgggaagcaaagccagggaa
gaccttgctgcagccacgcatgctgtggaggaactcatgtacaaaattcgagaaataaaa
accaaggcagaacagagtgaaaccatggtgcaggaaatatgtcgtgatattaagaagtta
gattttgcaaagaaacatataacaactactattactgctcttcatcggcttaccatgcta
gtttctgctgtcgagcaactccaagtaatggcttcaaagcggcaatataaggaggcagct
gcacaagtagaggctgtaaaccagttgtgtagtcattttgaagcttatagagatattcca
aagatcacagaactcagggagaagtttaagagcatcaaacaaattctcaagtcttatgtc
ttctctgatttttccagcttaggtacgggaaaagagacggaggaaagcaatttgctgcag
cagctatcagatgcttgcttagttgttgatgctttggagccgtcagttagggaagagttg
gtaaagaatttctgcagcagagagcttacttcatatcaacagatatttgaaggagctgag
ttagcaaagctagacaaagcagaaaggagatattcctggatcaaacgccgattgagaacg
aatgaggagatatggaaaatatttcctgcatcatggcatgttgcttatttgctttgcatc
cagttctgcaagttgacaaggaagcaacttgtagatatccttgataatttgaaggaaaaa
ccggatgttggaactttgttattggcactacaacgaactctggaatttgaggaagaattg
gcggagaaattcggtggtggtgtccagaacagagaaaaaaagactgacacggaggaagca
gataggggggacaatgtttcagatattagaaagaagtatgagaagaagcttgctaggcat
cagggaagtggagaagaggagccagatggatgcaaagatttgtctgctcctgcagctggg
tttaactttcgagggatcatttcatcttgctttgaaccttacttgatagtctatgtggaa
ctggaagagaagactctcatggaaaatctagagaaactggtccaggaagaaacttgggaa
attgaggaagggagccaaacaaatattttatccagtagcatgcaggtgtttttgatcatc
aggaggagcttaaagcgctgcagtgctttgacaaagaaccagacattattcaatttgttc
aaggtatttcaaagaattcttaaagcatatgccacaaagctttttgctagactgcccaag
ggaggaacaggaattgttgctgctgcaacgggaatggatggacaaattaagacatctgat
aaggacgaaagggtgatctgttatattgtaaataccgcggaatattgccacaaaacgtcc
ggtgaattggctgaaaatgtgtccaaactaattgatcctcaatttgtagacaaggtggat
atgtctgaagtacaggatgaattttcggcggtgataacaaaagcattgataacacttgta
catggtatagaaactaaatttgatgctgaaatgcttgcaatgacgcgagttccatggagt
acgcttgaaagtgttggtgatcaatcagaatatgtcaatggaataaatacaatatttagt
agcagcatccctgcactcggaacccttctttcttcaatttacttccagttctttcttgat
aagcttgcgtcatctcttcctccacgtttttattccaatatattcaggtgcaagcagata
tcagaaactggagcacagcaaatgttgttggatactcaggctgtaaagactattcttctg
gatattccttcccttggaagacagacttctggagcttctagctactcaaaatttgttagt
cgtgagatgagcaaggcggaagcactcttgaaggtcatactctccccgattgattctgtt
gcagatacatattgtgcactactgccagagggaacacctactgaattccaacggattctg
gaacttaagggtctgaagagaactgaccaacaaagtatattggatgattttagtcgacgt
gggtcaggaattactcagcctgcaattgctggcccttcagctgtcccatctgccccccct
ccctctgcagcacctgcaataacaagtccagttgtggttggaagcttaatttccagggaa
gatgtccttgccagggcagctgcacttggaagaggtgctgctacaactggattcaagaga
ttccttgctttaacggaggcagcgaaagatcgaaaggatttcaggaagcttttcaccgga
taa
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