Coffea arabica (coffee): 113696178
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Entry
113696178 CDS
T11342
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113696178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113696178
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
113696178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
HEAT
Beta-prop_TEP1_2nd
HEAT_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
HEAT_EZ
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_DCAF4
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
113696178
NCBI-ProteinID:
XP_071910271
UniProt:
A0ABM4USL7
LinkDB
All DBs
Position
6e:476438..491624
Genome browser
AA seq
1389 aa
AA seq
DB search
MALGDSMASRFSQSSMALAVVSNHLEELNISTSTTGNNSINHEDGERSVRDSETASSSYV
AGAAMTTTSMAYLPQTLVLCELRHDAFEGSLPSGPSDSGLVSKWRPRDRMKTGCVALVLC
LNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGRTLNQQYERWQPRARYKISLDP
TVDEVKKLCTTCRKYAKSERVLFHYNGHGVPKPTVNGEIWLFNKSYTQYIPLPIGDLDSW
LKTPSIYVFDCSAAGMIVNAFVELQDWTAAASASSGPSARDCILLAACEAHETLPQSAEF
PADVFTSCLTTPIKMALRWFCTRSLLRESLDYSLIDRIPGRQTDRKTLLGELNWIFTAVT
DTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPLSHPILPPTHQHHMWD
AWDMAAEICLSQLPTLVEDPNAEFQPSPFFTEQLTAFEVWLDHGSDLKKPPEQLPIVLQV
LLSQCHRFRALVLLGRFLDMGSWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKIL
ALDKSCQVDLVKDGGHAYFIRFLDSVEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLI
HVCLRHLQVSSPGDSQTEPLFLQWLCLCLGKLWEDFAEAQTMGVLADASAVLAPLLSEPQ
PEVRAAAVFALGTVLDVGFDTSRDGAGGEEDCDDDEKVRSEASIVKNLLNVVSDGSPLVR
AEVAVALARFAFGHNKHLKSVAAAYWKPQPNSVLAALPAFAVKGSGSGYTTPTQYMPHGS
IVPSAVSPLLRVGENSQPVVRDGRVFTSSPLATSGILHGSPLSDDSSQHSDSGIVADSIT
NGVVNHARPRPLDNALYSQCVLAMCTLAKDPSPRIASLGRRVLSIIGIESVVAKSVRSTP
GNAQPSESMANASTSLTGLARSSSWFDMNGGHLPLTFRTPPVSPPRPSYLTGMRRVYSLE
FRPHLMNSPDSGLADPLLATAGPSGASERSFLPQSTIYNWSCGHFSKPLLTATDDSEEII
ARREEREKLALDRIAKCQHSGGGGLTASLPFLLTAVNRLRDQIASWDAKFETGTRTGLLQ
PFSPVVVASDESETIRIWNYEESTLLNSFENHDYPDKGISKLCLVNELDESLLLVASSDG
NVRIWKDYTSKGQQKLVTALSSIQGHRPGVRSVNAVVDWQQQSGCLFASGEVSSIMAWDL
DKEQLVNTIPLSSDCSISALSASHIHGGQFVAGFSDGFVRLYDTRTPEMLVSATQPHTQR
LEKIVGIAFQPGLEPGKIVSASQAGYIQFLDLRHLRDTYLTIDAHRGSLTALAVHRHAPL
IASGSAKQLIKIFNLEGEQLGSIRYYPSFMAHKIGSVSSLTFHPYEVLLAAGTADACVSI
YADATSTAR
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggtgattcgatggcttctagattttcgcaatcatctatggccttggcggtg
gtgtccaatcatctcgaggagttaaatattagcactagtactaccggtaataatagcatt
aatcatgaggatggtgagaggagtgttagggattcggaaactgctagtagtagttatgtt
gctggtgccgcgatgacgacgacaagcatggcctatttgcctcagaccctggtactatgt
gagctccggcatgacgcttttgagggttccttgccctctggcccgtctgacagtggcttg
gtctccaaatggcggcctagggaccggatgaagacgggatgtgttgcccttgttttatgt
ttaaacattagtgttgatccacctgatgtaataaagatatctccttgtgcccggatggag
tgctggattgaccctttttcaatggcacctcaaaaagcgcttgaaacaattggaagaacc
ttaaaccaacagtacgagagatggcagcctagagctcgctacaagatctctttagatccc
actgtggatgaagtcaagaaactttgtacaacttgtcgtaaatatgccaagtcagagaga
gttttgtttcactataatgggcatggagttccaaaaccaacggtcaatggagaaatatgg
cttttcaataagagctatacacagtatattccattacctattggtgacttggattcttgg
ctgaagacaccttcaatatatgtctttgactgctctgctgctgggatgattgtcaatgcc
tttgtagagcttcaggactggactgctgctgcttctgcttcttctggtccttctgctagg
gattgcattttgcttgcagcctgtgaagcacatgagactcttcctcaaagtgctgaattt
ccggctgatgtgtttacttcctgccttacaactcccataaaaatggcattgagatggttt
tgtactcgttctttgcttcgtgagtctctagattattcacttatagatagaattcctggc
cggcaaactgatcggaagacgcttcttggagaattgaattggatttttacagcagtgaca
gacacaattgcctggaatgttctcccacatgatcttttccagagattgttcaggcaagat
ctattagttgcgagtctgttccgtaactttctacttgcggagagaatcatgcgctctgcc
aattgttcaccactttcgcatcccattttgccgccgacccatcaacatcatatgtgggac
gcttgggatatggctgctgaaatatgcctttctcagcttccaactcttgttgaggaccct
aatgcagaattccagcctagtccattctttacggagcaattaacagcttttgaggtgtgg
cttgatcatggatccgatcttaaaaaaccacctgaacagctgccaattgttcttcaggtt
ttacttagtcaatgtcataggttccgtgctttggtgctccttggaaggtttctggatatg
ggatcttgggctgtggatttggccttatctgttggaatatttccttacgttttaaagctc
ttgcaaacaactactcctgaacttaggcaaattcttgtgttcatttggacaaagattctt
gcgcttgataagtcttgccaggttgatctcgtgaaggatggtggacatgcatatttcatt
agatttctcgacagtgttgaagcttacccagagcaacgtgcaatggctgcatttgttttg
gctgtcattgtagatggtcacagacgaggtcaggaggcctgtattgaagctggtttgata
catgtatgcttgaggcaccttcaggtttcaagtccaggtgattcacaaactgaaccacta
tttcttcagtggctgtgcctatgtcttgggaaactatgggaagattttgcagaggcacaa
accatgggtgtgctggcagatgcctctgctgtattagcacctctactttctgagccccaa
cctgaggttcgagctgcagctgtttttgctctgggcactgtcctcgatgttgggtttgac
acatcaagagatggtgctgggggtgaggaagattgtgatgatgatgaaaaagttaggtct
gaggccagtattgtcaaaaaccttctgaatgttgtttctgatggaagtcctctggttcgt
gctgaggttgctgttgctctagctcgttttgcctttggccacaacaagcacctgaaatct
gttgctgctgcatactggaagcctcagcctaactctgtgcttgctgccttgcctgcgttt
gcagtcaagggttcaggtagtggctatacgactccaacacaatacatgcctcatggaagt
attgttccatctgcagtttctcctttgctcagagttggggaaaacagccagcctgtagtt
cgtgatggaagagtgtttaccagtagcccccttgcaacatctggaatcttgcatggctct
cctctctctgatgattcatctcagcattctgattctggcatagtggctgactccattacc
aatggggtagttaaccatgcaaggcctagacctcttgacaatgcactctattcacaatgt
gtgttggctatgtgcactctggccaaagatccatcgccacgaatcgccagccttggtcgt
cgagtattatctattattggcattgaatcggtggttgcaaaatcagtgaggtctactcct
ggtaatgcccagcctagtgaatccatggctaatgccagcactagtctcactggactagct
cggtcatcatcatggtttgatatgaatggagggcatttgcctctcacgtttagaacacct
ccagttagccctcctcggcctagttacttgacaggaatgcggagagtgtattccttggag
tttagaccacatctaatgaattctccagattctggattagctgatccacttttggcaaca
gctggaccttctggagcttcagaacgcagttttcttccacagtctacgatctacaattgg
agttgtggtcacttctcaaagcctcttcttacagctactgatgatagtgaagagattatt
gccagaagagaagagagagaaaagctggctttggaccgtattgcaaaatgccaacattct
ggagggggaggattaacagcatccttgccctttcttttgacagctgtgaacagactacgt
gatcaaattgccagttgggatgcaaaatttgagacaggtaccagaactggtttgctgcag
cccttttctccagtcgtggttgcttcagatgagagtgagacaatcagaatctggaattac
gaggaatctacactactgaacagttttgagaatcatgattaccctgacaaaggaatttca
aagctgtgtcttgtgaatgaacttgatgagagcttgctgcttgttgcttcaagtgatgga
aatgtccggatttggaaggattatacttcaaaaggtcaacaaaaactggttactgcactc
tcttcgattcaaggtcacaggccaggcgtgcggagtgtgaatgcagtagtcgattggcaa
cagcagtctggatgtctgtttgcttcgggtgaagtgtcatctatcatggcatgggatctg
gataaggagcagcttgtaaatactatcccattatcctcagattgcagcatttcagcactg
tctgcttctcacattcatgggggccagttcgtggctggtttttcggatggatttgtgaga
ttatatgacactcggacacctgaaatgcttgtttctgcaacacaaccgcatacacagaga
ttagaaaaaattgtgggaattgcctttcaacctggacttgagccaggaaagattgtgagt
gcctcgcaagctggctatattcagttccttgatttgagacatctcagggatacgtatctc
acaattgatgctcaccggggttcacttactgctttagctgtccatcgacatgctcccctt
attgctagcggctccgcaaagcagcttatcaaaatcttcaacttggaaggagagcaatta
ggcagcattcgatattacccaagtttcatggcccataagattgggtctgttagcagcctt
accttccatccttatgaagtgttgctggctgctggcactgcagatgcttgcgtttctatt
tatgctgatgcgacatctactgcaagatga
DBGET
integrated database retrieval system
