Coffea arabica (coffee): 113696385
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Entry
113696385 CDS
T11342
Name
(RefSeq) nuclear transcription factor Y subunit B-1-like
KO
K08065
nuclear transcription Y subunit beta
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113696385
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
113696385
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Bromo_TP
CENP-T_C
Terminase_2
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
113696385
NCBI-ProteinID:
XP_027071612
UniProt:
A0A6P6T0P7
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Position
1e:54506967..54507942
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AA seq
185 aa
AA seq
DB search
MVDSIIEGEGEGEGEGEALNKYKASVAAGCGSGDDGMAIKEQDRLLPIANVGRIMKQILP
ANAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDEYAEP
LKRYLNRFRELEGERANQNKSGNSEEKVMNQNLAEPRKITTHVSPTSINFNVMDESSNSL
SRSCF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggttgatagtattatagagggggagggagagggagagggagagggagaggccctcaac
aagtacaaggcttcggtggctgcaggctgtgggtcgggggatgatgggatggccattaaa
gagcaagatcggcttcttcccatagctaacgtgggccggataatgaagcagatcctgcct
gcaaacgccaaaatctccaaagaagctaaagaaaccatgcaagaatgtgcttctgagttc
attagttttgttactggagaagcttctgacaagtgtcacaaagagaagagaaaaactgtg
aacggggatgacatatgttgggccttgggaagccttggtttcgatgagtatgcggagccc
ctaaaaaggtacttgaacaggtttagagagttagaaggggagagagctaatcagaacaag
tctggcaatagtgaagaaaaggtgatgaatcaaaatttagcagaaccaaggaaaattacc
actcacgtctccccaacgtcaattaatttcaacgtcatggatgagagtagcaactctctc
tcgaggagctgtttttag
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