Coffea arabica (coffee): 113696430
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Entry
113696430 CDS
T11342
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113696430
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
113696430
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
113696430
NCBI-ProteinID:
XP_027071649
UniProt:
A0A6P6T015
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Position
1e:54853852..54855749
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AA seq
409 aa
AA seq
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MALREIKALYLVLASAALLLCNKGECSSFGARRGLAADVETVFDVTKFGARPDGRTDGSL
QMIRAWNAACKSGAPAKLVFPPGKFVAGEVVFQGPCTTPTPITIEIQGTILSSTDLSVFT
QGVWISIENVNGVIVTGGGTLDGRGASAWEYAGGDGAGLLPVSLQMLKVQNGVIQNINLL
NSKGFHSKVTWSANITVSDLTITAPADSPNTDGLHISSSQNVNVTNLTIGTGDDCISVGE
GNTNIAISKITCGPGHGISIGSLGKRPAEKDVNGVTVTNCTLTGTTNGARIKTYHASPPM
RASGIVYEDIIMNVVRNPIVIDQHYNSRKKNQPSRVQISDVHFRNIRGTSASPVAVNLDC
SQAVPCQGVEMVDINLAPAPGVAAISSACINTKPTLGGKLTLGQGGCQQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagagagatcaaggcgttgtatctagtattggcttcagcggccttgctcttg
tgtaacaagggagaatgtagctcttttggagcccgtcgtggcctagcagctgacgttgag
acagtttttgatgttaccaagtttggggcaaggcccgatggcagaactgatggctctctg
caaatgatcagggcatggaatgctgcatgcaaatcaggcgcaccggcgaagcttgttttt
cctccgggcaaatttgtggcaggggaggtagtcttccaggggccatgcaccaccccaaca
cccataaccattgaaatccaaggaaccattttatcgagcaccgatcttagcgtgttcact
cagggagtatggatatctatcgaaaatgtgaatggggtcatagtcaccggtggaggtact
ctcgacggccgaggggcctctgcctgggaatatgcaggaggagatggtgctggccttctt
ccagtttctcttcaaatgttgaaagtacaaaatggtgttatccaaaatatcaacctgctt
aacagtaaaggcttccacagcaaggtcacctggagcgccaacatcaccgtgtcggacctc
actataacagcccctgcagatagccccaatactgatggcctccacattagcagctctcaa
aatgtgaatgtcacaaacctcaccataggaacaggagacgactgtatctccgtgggcgaa
ggcaacaccaacattgccatctccaagattacttgtggcccaggacatggcatcagcatt
ggaagcttggggaagcgcccggcggaaaaagatgtgaacggggtaaccgtaacaaactgt
acattgacaggcacaaccaatggcgcaaggattaaaacctaccatgcatctcccccgatg
cgtgcttctggtatcgtttatgaggacataataatgaacgtcgtcagaaatccaatcgtc
attgatcagcattacaattccaggaaaaagaaccagccgtcgagggtgcaaatcagcgat
gttcacttccggaatatcaggggaacctccgcatcaccagttgcagttaatctggattgc
agccaggcagtcccgtgccaaggcgttgagatggtcgatattaatttagctccagctccg
ggagtggctgctatttcatctgcctgcatcaacaccaaaccaactttgggaggcaagctc
accttgggtcaaggtggttgtcagcagtaa
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